BLASTX nr result

ID: Atractylodes22_contig00031479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031479
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    65   4e-09
emb|CBI19367.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_003549369.1| PREDICTED: pre-mRNA-processing factor 40 hom...    65   6e-09
ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arab...    65   6e-09
ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    64   1e-08

>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%)
 Frame = -2

Query: 148 DFTELLHNIKEINASSTWEEFRQLFDESSTYRSIGDESFARVTFEEYVA 2
           DF +LL + KEI ASS WE+ + LF+ES  YRSIG+ESF R  FEEY+A
Sbjct: 808 DFNDLLRSKKEITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIA 856


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%)
 Frame = -2

Query: 148 DFTELLHNIKEINASSTWEEFRQLFDESSTYRSIGDESFARVTFEEYVA 2
           DF +LL + KEI ASS WE+ + LF+ES  YRSIG+ESF R  FEEY+A
Sbjct: 818 DFNDLLRSKKEITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIA 866


>ref|XP_003549369.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 963

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -2

Query: 148 DFTELLHNIKEINASSTWEEFRQLFDESSTYRSIGDESFARVTFEEYV 5
           DFT LL+  K+I ASS WE+ + LF+E+  YRSIGDES++R  FEEY+
Sbjct: 752 DFTNLLYTFKDITASSKWEDCKSLFEEAQEYRSIGDESYSREIFEEYI 799


>ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arabidopsis lyrata subsp.
           lyrata] gi|297337146|gb|EFH67563.1| hypothetical protein
           ARALYDRAFT_891421 [Arabidopsis lyrata subsp. lyrata]
          Length = 967

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = -2

Query: 148 DFTELLHNIKEINASSTWEEFRQLFDESSTYRSIGDESFARVTFEEYV 5
           +FT LLH  KEI A+S WE+ +QL +ES  YRSIGDES +R  FEEY+
Sbjct: 753 EFTNLLHTFKEITAASNWEDSKQLLEESQEYRSIGDESVSRGLFEEYI 800


>ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein
           40A-like, partial [Cucumis sativus]
          Length = 803

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -2

Query: 148 DFTELLHNIKEINASSTWEEFRQLFDESSTYRSIGDESFARVTFEEYV 5
           DF+ LL ++KEI  SS WE+ +QLF+ES  YRSIG+ESFA+  FEE++
Sbjct: 595 DFSGLLQSLKEITTSSNWEDSKQLFEESEEYRSIGEESFAKEVFEEHI 642


Top