BLASTX nr result

ID: Atractylodes22_contig00031462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031462
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39588.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002512504.1| peptide chain release factor, putative [Rici...   172   2e-41
ref|XP_002319484.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_004168863.1| PREDICTED: peptide chain release factor 2-li...   166   2e-39
ref|XP_004135582.1| PREDICTED: peptide chain release factor 2-li...   166   2e-39

>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  179 bits (454), Expect = 2e-43
 Identities = 97/156 (62%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
 Frame = +3

Query: 39  QSINSSTSNGKPQNHGSGFEFLSKNASGVSSISNKIWNFSCGSSTSLNNTRLL--FSTQA 212
           QS N S+SN       SG+ FL KN +G SS+  +      G      N+R +  F +QA
Sbjct: 14  QSRNFSSSNSNKVVLCSGYGFLGKNMTGFSSVMMETSINPSGFHQVSGNSRWVRQFGSQA 73

Query: 213 AVEPSTSDGLTVDGIVANQWTILDESESDWKSHASAIAQSIGLIKKRLQWKKLKVRLEML 392
           A E STSDGLTV+GI+ANQW ILDESESDWKSHA+AIA SI LIKKRLQWKKL VRL++L
Sbjct: 74  AAEASTSDGLTVEGIIANQWPILDESESDWKSHAAAIALSIHLIKKRLQWKKLVVRLDVL 133

Query: 393 SIQLEKPDIWDDPVHAGRISREHGSLMGKMKEVDGL 500
           S QL KPD+WD+PVHAG+ISREHG LMGKMK V  L
Sbjct: 134 SAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 169


>ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
           gi|223548465|gb|EEF49956.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 550

 Score =  172 bits (437), Expect = 2e-41
 Identities = 94/150 (62%), Positives = 111/150 (74%), Gaps = 6/150 (4%)
 Frame = +3

Query: 60  SNGKPQNH---GSGFEFLSKNASGVSS--ISNKIWNFSCGSSTSLNNTRL-LFSTQAAVE 221
           S+G  +N+    SG   L +N SG +S  +   I  + C      N+  L  FSTQAAVE
Sbjct: 49  SSGCSENYRVLASGTGVLQRNFSGFASAQLPRVICRYECNKDPVNNSMWLYFFSTQAAVE 108

Query: 222 PSTSDGLTVDGIVANQWTILDESESDWKSHASAIAQSIGLIKKRLQWKKLKVRLEMLSIQ 401
            ST+DGLTVDGIVAN W ILDE+ESDWKSHA+AIAQSI +IKKRLQWKKL VRL++LS+Q
Sbjct: 109 LSTTDGLTVDGIVANNWIILDENESDWKSHAAAIAQSIQVIKKRLQWKKLMVRLDLLSVQ 168

Query: 402 LEKPDIWDDPVHAGRISREHGSLMGKMKEV 491
           L KPD+WDDPV AG+ISREHGSLM K KEV
Sbjct: 169 LNKPDLWDDPVLAGKISREHGSLMAKRKEV 198


>ref|XP_002319484.1| predicted protein [Populus trichocarpa] gi|222857860|gb|EEE95407.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/99 (81%), Positives = 92/99 (92%)
 Frame = +3

Query: 195 LFSTQAAVEPSTSDGLTVDGIVANQWTILDESESDWKSHASAIAQSIGLIKKRLQWKKLK 374
           LFSTQAA E STSDG+TVDGIVA+ WTILDESESDWKSHA+AIAQSI +IK+RLQWKKL 
Sbjct: 82  LFSTQAAAELSTSDGITVDGIVASNWTILDESESDWKSHAAAIAQSIQVIKRRLQWKKLM 141

Query: 375 VRLEMLSIQLEKPDIWDDPVHAGRISREHGSLMGKMKEV 491
           VRL++LS+QL KPD+WDDPVHAG+ISREHGSLM KMK+V
Sbjct: 142 VRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKV 180


>ref|XP_004168863.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
          Length = 472

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/119 (68%), Positives = 97/119 (81%)
 Frame = +3

Query: 138 NKIWNFSCGSSTSLNNTRLLFSTQAAVEPSTSDGLTVDGIVANQWTILDESESDWKSHAS 317
           NKI+ F          T  LFSTQ A EPSTSDGLTV+GI+ N+WTILDESESDW+SHA+
Sbjct: 58  NKIFGFPF-------TTLRLFSTQIAFEPSTSDGLTVEGILGNRWTILDESESDWRSHAA 110

Query: 318 AIAQSIGLIKKRLQWKKLKVRLEMLSIQLEKPDIWDDPVHAGRISREHGSLMGKMKEVD 494
           AIAQSI LIKKRLQWKKL +RLE+LS++L K D+WDDP HAG+ISREHGS+M K+KE++
Sbjct: 111 AIAQSIHLIKKRLQWKKLMMRLELLSVELNKADLWDDPAHAGKISREHGSIMSKIKEIN 169


>ref|XP_004135582.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
          Length = 467

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/119 (68%), Positives = 97/119 (81%)
 Frame = +3

Query: 138 NKIWNFSCGSSTSLNNTRLLFSTQAAVEPSTSDGLTVDGIVANQWTILDESESDWKSHAS 317
           NKI+ F          T  LFSTQ A EPSTSDGLTV+GI+ N+WTILDESESDW+SHA+
Sbjct: 53  NKIFGFPF-------TTLRLFSTQIAFEPSTSDGLTVEGILGNRWTILDESESDWRSHAA 105

Query: 318 AIAQSIGLIKKRLQWKKLKVRLEMLSIQLEKPDIWDDPVHAGRISREHGSLMGKMKEVD 494
           AIAQSI LIKKRLQWKKL +RLE+LS++L K D+WDDP HAG+ISREHGS+M K+KE++
Sbjct: 106 AIAQSIHLIKKRLQWKKLMMRLELLSVELNKADLWDDPAHAGKISREHGSIMSKIKEIN 164


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