BLASTX nr result

ID: Atractylodes22_contig00031386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031386
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531856.1| starch synthase, putative [Ricinus communis]...    59   3e-07
sp|Q43847.3|SSY2_SOLTU RecName: Full=Granule-bound starch syntha...    57   2e-06

>ref|XP_002531856.1| starch synthase, putative [Ricinus communis]
           gi|223528506|gb|EEF30534.1| starch synthase, putative
           [Ricinus communis]
          Length = 754

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
 Frame = -3

Query: 392 EKSVLL---SNHRPYWIPSFAIYRPRKPPTDLIFVCHNGYVAGGG---RVRRIKATKEKS 231
           E S+L    S  R    PSFA YRP         + ++  ++  G   R++ ++AT +  
Sbjct: 16  ESSILFHGKSQQRSSKFPSFA-YRPN--------ISYSFAISNDGFPLRLKSVRATGKDG 66

Query: 230 FAMDGGRDTNDAPQATIDKSRKNFAMQKDLLPQIVERRE--TDASESILDDGADVPASDD 57
              DG   + DA Q TI+KS+K  AMQKDLL QI ERR+  +D   SI+D   D  + D 
Sbjct: 67  VNSDG---SEDAIQTTIEKSKKVLAMQKDLLQQIAERRKLVSDIKSSIIDQELDSTSYDQ 123

Query: 56  VESPPLAGPN 27
            ES  L  PN
Sbjct: 124 TES-SLPNPN 132


>sp|Q43847.3|SSY2_SOLTU RecName: Full=Granule-bound starch synthase 2,
           chloroplastic/amyloplastic; AltName: Full=Granule-bound
           starch synthase II; Short=GBSS-II; Short=SS II; Flags:
           Precursor gi|48927500|emb|CAA61241.2| soluble starch
           synthase II precursor [Solanum tuberosum]
          Length = 767

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
 Frame = -3

Query: 395 IEKSVLLSNHRPYW--IPSFAIYRPRKPPTDLIFVCHNGYVAGGGRVRRIKATKEKSFAM 222
           +E S+LL +   +   +P  A+ RP+K     + + H        R++R+KAT E S   
Sbjct: 1   MENSILLHSGNQFHPNLPLLAL-RPKK-----LSLIHGSSREQMWRIKRVKATGENSGEA 54

Query: 221 DGGRDTNDAPQATIDKSRKNFAMQKDLLPQIVERRETDAS 102
               ++NDA Q TI+KS+K  AMQ+DLL QI ERR+  +S
Sbjct: 55  ASADESNDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSS 94


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