BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031300
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB67831.1| ribsomal protein S4 [Zea mays] gi|194707820|gb|AC...   123   1e-26
ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group] g...   122   2e-26
ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group] g...   122   2e-26
sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4 gi|...   122   2e-26
ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [S...   122   2e-26

>gb|AAB67831.1| ribsomal protein S4 [Zea mays] gi|194707820|gb|ACF87994.1| unknown
           [Zea mays] gi|195607094|gb|ACG25377.1| 40S ribosomal
           protein S4 [Zea mays] gi|195653033|gb|ACG45984.1| 40S
           ribosomal protein S4 [Zea mays]
           gi|414873848|tpg|DAA52405.1| TPA: ribosomal protein S4
           [Zea mays]
          Length = 265

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/82 (74%), Positives = 63/82 (76%)
 Frame = +3

Query: 3   RLNAPKHWMLDKLGGAFAPKPSSGPHKSXXXXXXXXXXXXXXXXXXDYREVISILMQRHV 182
           RLNAPKHWMLDKLGGAFAPKPSSGPHKS                  +YREVISILMQRHV
Sbjct: 11  RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALNYREVISILMQRHV 70

Query: 183 LVDNKVRTDKTYPAGFMDVVSI 248
           LVD KVRTDKTYPAGFMDV+SI
Sbjct: 71  LVDGKVRTDKTYPAGFMDVISI 92


>ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group]
           gi|53791616|dbj|BAD52963.1| putative 40S ribosomal
           protein S4 [Oryza sativa Japonica Group]
           gi|113532546|dbj|BAF04929.1| Os01g0358400 [Oryza sativa
           Japonica Group] gi|125525886|gb|EAY74000.1| hypothetical
           protein OsI_01884 [Oryza sativa Indica Group]
           gi|125570348|gb|EAZ11863.1| hypothetical protein
           OsJ_01737 [Oryza sativa Japonica Group]
           gi|149391309|gb|ABR25672.1| 40S ribosomal protein S4
           [Oryza sativa Indica Group] gi|215692713|dbj|BAG88133.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 265

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/82 (74%), Positives = 62/82 (75%)
 Frame = +3

Query: 3   RLNAPKHWMLDKLGGAFAPKPSSGPHKSXXXXXXXXXXXXXXXXXXDYREVISILMQRHV 182
           RLNAPKHWMLDKLGGAFAPKPSSGPHKS                   YREVISILMQRHV
Sbjct: 11  RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHV 70

Query: 183 LVDNKVRTDKTYPAGFMDVVSI 248
           LVD KVRTDKTYPAGFMDV+SI
Sbjct: 71  LVDGKVRTDKTYPAGFMDVISI 92


>ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group]
           gi|109940160|sp|P49398.3|RS4_ORYSJ RecName: Full=40S
           ribosomal protein S4; AltName: Full=SCAR protein SS620
           gi|313103631|pdb|3IZ6|D Chain D, Localization Of The
           Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em
           Map Of Triticum Aestivum Translating 80s Ribosome
           gi|50252099|dbj|BAD28085.1| putative ribosomal protein
           S4 [Oryza sativa Japonica Group]
           gi|113535155|dbj|BAF07538.1| Os02g0105900 [Oryza sativa
           Japonica Group] gi|125537716|gb|EAY84111.1| hypothetical
           protein OsI_05494 [Oryza sativa Indica Group]
           gi|125580492|gb|EAZ21423.1| hypothetical protein
           OsJ_05027 [Oryza sativa Japonica Group]
           gi|169244433|gb|ACA50490.1| 40S ribosomal protein S4
           [Oryza sativa Japonica Group]
           gi|215678909|dbj|BAG96339.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215734827|dbj|BAG95549.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|306415995|gb|ADM86872.1| 40S ribosomal protein S4
           [Oryza sativa Japonica Group]
          Length = 265

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/82 (74%), Positives = 62/82 (75%)
 Frame = +3

Query: 3   RLNAPKHWMLDKLGGAFAPKPSSGPHKSXXXXXXXXXXXXXXXXXXDYREVISILMQRHV 182
           RLNAPKHWMLDKLGGAFAPKPSSGPHKS                   YREVISILMQRHV
Sbjct: 11  RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHV 70

Query: 183 LVDNKVRTDKTYPAGFMDVVSI 248
           LVD KVRTDKTYPAGFMDV+SI
Sbjct: 71  LVDGKVRTDKTYPAGFMDVISI 92


>sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4 gi|2331301|gb|AAB66899.1|
           ribosomal protein S4 type I [Zea mays]
           gi|194698488|gb|ACF83328.1| unknown [Zea mays]
           gi|195618184|gb|ACG30922.1| 40S ribosomal protein S4
           [Zea mays] gi|195625650|gb|ACG34655.1| 40S ribosomal
           protein S4 [Zea mays] gi|413932477|gb|AFW67028.1|
           putative ribosomal protein S4 (RPS4A) family protein
           [Zea mays]
          Length = 265

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/82 (74%), Positives = 62/82 (75%)
 Frame = +3

Query: 3   RLNAPKHWMLDKLGGAFAPKPSSGPHKSXXXXXXXXXXXXXXXXXXDYREVISILMQRHV 182
           RLNAPKHWMLDKLGGAFAPKPSSGPHKS                   YREVISILMQRHV
Sbjct: 11  RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHV 70

Query: 183 LVDNKVRTDKTYPAGFMDVVSI 248
           LVD KVRTDKTYPAGFMDV+SI
Sbjct: 71  LVDGKVRTDKTYPAGFMDVISI 92


>ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
           gi|241917406|gb|EER90550.1| hypothetical protein
           SORBIDRAFT_01g001850 [Sorghum bicolor]
          Length = 264

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/82 (74%), Positives = 62/82 (75%)
 Frame = +3

Query: 3   RLNAPKHWMLDKLGGAFAPKPSSGPHKSXXXXXXXXXXXXXXXXXXDYREVISILMQRHV 182
           RLNAPKHWMLDKLGGAFAPKPSSGPHKS                   YREVISILMQRHV
Sbjct: 11  RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHV 70

Query: 183 LVDNKVRTDKTYPAGFMDVVSI 248
           LVD KVRTDKTYPAGFMDV+SI
Sbjct: 71  LVDGKVRTDKTYPAGFMDVISI 92