BLASTX nr result

ID: Atractylodes22_contig00031266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031266
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...    59   5e-07
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]          58   7e-07
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]         58   7e-07
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]          57   1e-06
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]         57   2e-06

>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 139 SNSTIRSVLEKDKLIGINFIDWYRNLRIVLRAENK 243
           SN  +RS+LEK+KL GINF+DWYRNLRIVLR E+K
Sbjct: 70  SNFNLRSILEKEKLTGINFMDWYRNLRIVLRQEHK 104


>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
          Length = 746

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +1

Query: 139 SNSTIRSVLEKDKLIGINFIDWYRNLRIVLRAENK 243
           SN  +RS+LEK+KLIG NF+DWYRNLRIVLR E K
Sbjct: 47  SNFNLRSILEKEKLIGTNFMDWYRNLRIVLRQEQK 81


>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
          Length = 276

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +1

Query: 115 MTTTNQTLSNSTIRSVLEKDKLIGINFIDWYRNLRIVLRAENK 243
           M T   T S+  +RS+LEK+KL G NF+DWYRNLRIVLR E+K
Sbjct: 1   MITAAPTSSSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHK 43


>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +1

Query: 133 TLSNSTIRSVLEKDKLIGINFIDWYRNLRIVLRAENK 243
           T SN  +RS+LEK+KL G NF+DWYRNLRIVLR E+K
Sbjct: 5   TPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHK 41


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 88  KIRSSHATKMTTTNQTLSNSTIRSVLEKDKLIGINFIDWYRNLRIVLRAENK 243
           KI ++HA          SN  +RS+LEK+KL G NF+DWYRNLRIVLR E+K
Sbjct: 76  KIMAAHAP---------SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHK 118


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