BLASTX nr result

ID: Atractylodes22_contig00031258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031258
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593990.1| F-box protein [Medicago truncatula] gi|35548...    62   4e-08
ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...    62   4e-08

>ref|XP_003593990.1| F-box protein [Medicago truncatula] gi|355483038|gb|AES64241.1|
           F-box protein [Medicago truncatula]
          Length = 566

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
 Frame = +1

Query: 1   IPFDVLKMIMEEFCVGVDYLNFRATCRRCRLAAPVIQARK----RLKTYSPVSPW-LMVF 165
           +P DV ++I +     +DYL+FRA  +  RLAAP IQ R      +  +  +S   L VF
Sbjct: 338 LPLDVAEVIAKHLNDVLDYLHFRACNKLLRLAAPPIQWRSSSCMSMSRFDHLSMCPLFVF 397

Query: 166 DRDGGIITFTDPMFG--DKYYIKAAACEEFFHDCRILCSRYGWLLVL-MGDVRVAFFNPF 336
             D  + TF  P  G   KY I     E ++ +  I CS+ GWLL++ +      FFNPF
Sbjct: 398 SADDKVFTFLHPKHGLKYKYLINFPQVEPWYINYEICCSKDGWLLLVGVDQTSQFFFNPF 457

Query: 337 T 339
           T
Sbjct: 458 T 458


>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
           gi|223527710|gb|EEF29816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 690

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/116 (36%), Positives = 60/116 (51%)
 Frame = +1

Query: 1   IPFDVLKMIMEEFCVGVDYLNFRATCRRCRLAAPVIQARKRLKTYSPVSPWLMVFDRDGG 180
           +P DV+  ++ +    V YLN R TC   R  AP IQ +  L+ +S  SP LM F++D  
Sbjct: 352 LPSDVITSLIIKRLNLVHYLNLRTTCSLFRSLAPPIQQKLCLQNHSS-SPRLMFFEKD-N 409

Query: 181 IITFTDPMFGDKYYIKAAACEEFFHDCRILCSRYGWLLVLMGDVRVAFFNPFTGDI 348
           I TF +P   DK Y+      +    C+I  S+ GW ++  G      FNP TG+I
Sbjct: 410 ICTFFEPKNSDKCYLH---LPQQLAGCQICYSKDGWFMMSRGKNFFYCFNPLTGEI 462


Top