BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031223
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73042.1| polyprotein [Ananas comosus]                          113   1e-23
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   112   4e-23
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc...   110   2e-22
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc...   108   3e-22
emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group] gi...   108   3e-22

>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/125 (44%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   LELIKDYDVHIQYHPGKANVVADALSRKHSASVS-YMYVQPQLIVDMERMGLELRLPASD 177
           LEL+KDYD+ I YHPGKANVVADALSRK   +++ ++  QP+LI  M+R+ LE+  P + 
Sbjct: 401 LELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTP 460

Query: 178 GVVSNITLESTLVSQVKEAQRSDKELLELRQKIEGGASTEFAMDGQGTIWFRNRLCVPNE 357
             +  + ++ TL+ ++KE Q SD EL +++ K+  G + +F +DG G + FR R+CVP +
Sbjct: 461 MRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPAD 520

Query: 358 PGLRE 372
            G++E
Sbjct: 521 SGIKE 525


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/125 (44%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   LELIKDYDVHIQYHPGKANVVADALSRK-HSASVSYMYVQPQLIVDMERMGLELRLPASD 177
           LELIKDYD+ I YHPGKANVVADALSRK +  ++     QP+L  +++ + LE+    + 
Sbjct: 508 LELIKDYDLGIHYHPGKANVVADALSRKAYCNTILVQKNQPELYEELKHLNLEI---VNQ 564

Query: 178 GVVSNITLESTLVSQVKEAQRSDKELLELRQKIEGGASTEFAMDGQGTIWFRNRLCVPNE 357
           G V+ + ++ TL SQ++E Q  D+++ E+++ +  G +  F+ D QGT+WF NR+CVPN+
Sbjct: 565 GCVNALEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICVPNQ 624

Query: 358 PGLRE 372
             L++
Sbjct: 625 QELKQ 629


>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1759

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/125 (45%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1    LELIKDYDVHIQYHPGKANVVADALSRKHSASVSYMYV-QPQLIVDMERMGLELRLPASD 177
            LELIKDYD+ I YHPGKANVVADALSRK   +V  +   Q +L  D+E++ L +      
Sbjct: 1217 LELIKDYDLGIHYHPGKANVVADALSRKTYCNVDQIRPDQDRLCRDLEKLRLTV---VQS 1273

Query: 178  GVVSNITLESTLVSQVKEAQRSDKELLELRQKIEGGASTEFAMDGQGTIWFRNRLCVPNE 357
            GV +++T++ TL SQ+++AQ+ D+ + EL ++I+    T+F++D QGT+W+  R+CVP +
Sbjct: 1274 GVAASLTVQPTLESQIRKAQKDDEGIKELIKRIQEKKDTDFSIDDQGTVWYGPRICVPAK 1333

Query: 358  PGLRE 372
              LR+
Sbjct: 1334 KELRD 1338


>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1851

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1    LELIKDYDVHIQYHPGKANVVADALSRKHSASVSYMYV-QPQLIVDMERMGLELRLPASD 177
            LELIKDYD+ I YHPGKANVVADALSRK   +V+ +   Q QL  ++E++ L +      
Sbjct: 1309 LELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDQLCRELEKLRLTV---VQS 1365

Query: 178  GVVSNITLESTLVSQVKEAQRSDKELLELRQKIEGGASTEFAMDGQGTIWFRNRLCVPNE 357
            GV +++T++ TL SQ++EAQ+ D+ + EL ++I+    T F++D QGT+W   R+CVP +
Sbjct: 1366 GVPASLTVQPTLESQIREAQKEDEGIKELIERIQEKKDTNFSIDDQGTVWCGPRICVPAK 1425

Query: 358  PGLRE 372
              LR+
Sbjct: 1426 KELRD 1430


>emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group]
            gi|38347324|emb|CAE05974.2| OSJNBa0063C18.15 [Oryza
            sativa Japonica Group]
          Length = 1764

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1    LELIKDYDVHIQYHPGKANVVADALSRKHSASVSYMYV-QPQLIVDMERMGLELRLPASD 177
            LELIKDYD+ I YHPGKANVVADALSRK   +V+ +   Q  L  ++E++ L +  P   
Sbjct: 1266 LELIKDYDLRIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLRLTMVQP--- 1322

Query: 178  GVVSNITLESTLVSQVKEAQRSDKELLELRQKIEGGASTEFAMDGQGTIWFRNRLCVPNE 357
            GV +++T++ TL SQ++EAQ+ D+ + EL ++I+    T F++D QGT+W   R+CVP +
Sbjct: 1323 GVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDNQGTVWCGPRICVPAK 1382

Query: 358  PGLRE 372
              LR+
Sbjct: 1383 KELRD 1387