BLASTX nr result

ID: Atractylodes22_contig00031172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031172
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin...   103   1e-20
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici...    99   3e-19
ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containin...    92   4e-17
ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containin...    92   4e-17

>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
           vinifera]
          Length = 457

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = -1

Query: 457 RERDMKPKIMKPCIYYNSTRGCRHGANCVYQHDSSSQQRVSSLAEAQSAKRTKMDREISG 278
           + RD KPKIMKPCIY++S+RGCRHGANC YQHD+S QQRVSS+ E Q+AKR KMDREI+G
Sbjct: 397 KPRDSKPKIMKPCIYFHSSRGCRHGANCSYQHDASLQQRVSSMPEVQNAKRMKMDREITG 456

Query: 277 T 275
           T
Sbjct: 457 T 457


>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551205|gb|EEF52691.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 461

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/59 (72%), Positives = 52/59 (88%)
 Frame = -1

Query: 457 RERDMKPKIMKPCIYYNSTRGCRHGANCVYQHDSSSQQRVSSLAEAQSAKRTKMDREIS 281
           + R++KPKIMKPCIY+NS+RGCRHGANC YQHD S QQR S+++E QSAKR K+DREIS
Sbjct: 402 KSRELKPKIMKPCIYFNSSRGCRHGANCAYQHDPSFQQRSSAISEVQSAKRMKVDREIS 460


>ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|222843717|gb|EEE81264.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/59 (69%), Positives = 49/59 (83%)
 Frame = -1

Query: 457 RERDMKPKIMKPCIYYNSTRGCRHGANCVYQHDSSSQQRVSSLAEAQSAKRTKMDREIS 281
           + R+ K KIMKPCIY+NS+RGCR+G NC YQHDSSSQQ+ S + E QS+KR KMDREIS
Sbjct: 366 KSRESKHKIMKPCIYFNSSRGCRNGVNCAYQHDSSSQQKGSGITEVQSSKRMKMDREIS 424


>ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Cucumis sativus]
          Length = 444

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -1

Query: 451 RDMKPKIMKPCIYYNSTRGCRHGANCVYQHDSSSQQRVSSLAEAQSAKRTKMDREIS 281
           RD K KIMKPCIY+NS+RGCRHGANC YQHD   QQR SS++E  S+KRTK+DREIS
Sbjct: 387 RDAKFKIMKPCIYFNSSRGCRHGANCAYQHDPMFQQRSSSVSEMPSSKRTKVDREIS 443


>ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Cucumis sativus]
          Length = 441

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -1

Query: 451 RDMKPKIMKPCIYYNSTRGCRHGANCVYQHDSSSQQRVSSLAEAQSAKRTKMDREIS 281
           RD K KIMKPCIY+NS+RGCRHGANC YQHD   QQR SS++E  S+KRTK+DREIS
Sbjct: 384 RDAKFKIMKPCIYFNSSRGCRHGANCAYQHDPMFQQRSSSVSEMPSSKRTKVDREIS 440


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