BLASTX nr result

ID: Atractylodes22_contig00031160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031160
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318952.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
emb|CAN71689.1| hypothetical protein VITISV_039291 [Vitis vinifera]    84   1e-14
ref|XP_004137554.1| PREDICTED: putative F-box protein At1g67623-...    75   7e-12
ref|XP_004166031.1| PREDICTED: putative F-box protein At1g67623-...    64   1e-08
ref|XP_004135532.1| PREDICTED: putative F-box protein At1g67623-...    64   1e-08

>ref|XP_002318952.1| predicted protein [Populus trichocarpa] gi|222857328|gb|EEE94875.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
 Frame = -3

Query: 428 GVEYLKRATEKAHVEATYVYGMILLSRGGQSSQQGLNILNSMKVSRSKYSKIRDCRAKIK 249
           G ++LK A  K HVEA Y  G+IL+  GGQ  Q+G+ +L+S+K  +S++  I++CR KIK
Sbjct: 109 GFQHLKNAARKGHVEAIYTCGVILVCHGGQFKQEGIELLSSLKNYKSRHRTIKECRDKIK 168

Query: 248 AIIREMWINN---SISLIELRCKCQDRNVSCIKKRKFDEEEDVICCDACGWHREVISFCK 78
            I++ MWI+     I   E +   +  N S   KR + +EE+   CD C W  E   FCK
Sbjct: 169 EILQSMWIDRREAGIGPEEPKSHGRTCNCSKFNKRGWIDEEEYTTCDYCVWDHEATLFCK 228

Query: 77  IV 72
           I+
Sbjct: 229 IL 230


>emb|CAN71689.1| hypothetical protein VITISV_039291 [Vitis vinifera]
          Length = 241

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 19/135 (14%)
 Frame = -3

Query: 422 EYLKRATEKAHVEATYVYGMILLSRGGQSS-QQGLNILNSMKVSRSKYSKIRDCRAKIKA 246
           EYLKRA E  H+EA+YVYG+ILL +GG S+ +QG+ +LN++K SR    K+ +CR + +A
Sbjct: 113 EYLKRAMEMGHMEASYVYGIILLCKGGDSNEEQGMKLLNAVKKSR----KLGECRKRTRA 168

Query: 245 IIREMWINNSISLIELRCK---------CQDRNVSCIKKRK-----FDEE----EDVICC 120
               MWI N I    ++C+         C  RN   I  ++      D+E    E+V  C
Sbjct: 169 FTLSMWIRNPI----VKCQELTSYHANTCGRRNNGGIGGKRGWPWIEDDEDKDVEEVNYC 224

Query: 119 DACGWHREVISFCKI 75
           +AC W  EV  FCK+
Sbjct: 225 EACIWDDEVSLFCKL 239


>ref|XP_004137554.1| PREDICTED: putative F-box protein At1g67623-like [Cucumis sativus]
          Length = 260

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
 Frame = -3

Query: 428 GVEYLKRATEKAHVEATYVYGMILLSRGGQSSQQGLNILNSMKVSRSKYSKIRDCRAKIK 249
           G+ YLKR+ +K +V+A YV+G+IL +       +GL  L + +V     +K+ +CR ++K
Sbjct: 129 GMAYLKRSAQKGYVDACYVFGVILYA--SNLKDEGLEFLKNNEVKLG--NKMIECRQRVK 184

Query: 248 AIIREMWINNSISLIE----LRCKCQDRNVSCIKKRKFD-----EEEDV---ICCDACGW 105
             +  +WI N ISL E       KC D+N++C    K +     +E+D      C+ C W
Sbjct: 185 EFVSYIWIKNKISLSEGDSSYGRKC-DKNINCRVNEKINVWDSKDEDDYYGKYTCEECKW 243

Query: 104 HREVISFCKIV 72
           + EV+ FCK++
Sbjct: 244 NNEVLRFCKML 254


>ref|XP_004166031.1| PREDICTED: putative F-box protein At1g67623-like, partial [Cucumis
           sativus]
          Length = 246

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
 Frame = -3

Query: 428 GVEYLKRATEKAHVEATYVYGMILLSRGGQSSQQGLNILNSMKVSRSKYSKIRDCRAKIK 249
           G+ YLKR+ +K +V+A YV+G+IL +       +GL  L + +V     +K+ +CR ++K
Sbjct: 129 GMAYLKRSAQKGYVDACYVFGVILYA--SNLKDEGLEFLKNNEVKLG--NKMIECRQRVK 184

Query: 248 AIIREMWINNSISLIE----LRCKCQDRNVSCIKKRKFD-----EEEDV---ICCDACGW 105
             +  +WI N ISL E       KC D+N++C    K +     +E+D      C+ C W
Sbjct: 185 EFVSYIWIKNKISLSEGDSSYGRKC-DKNINCRVNEKINVWDSKDEDDYYGKYTCEECKW 243

Query: 104 HRE 96
           + E
Sbjct: 244 NNE 246


>ref|XP_004135532.1| PREDICTED: putative F-box protein At1g67623-like [Cucumis sativus]
          Length = 255

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
 Frame = -3

Query: 428 GVEYLKRATEKAHVEATYVYGMILLSRGGQSSQQGLNILNSMKVSRSKYSKIRDCRAKIK 249
           G+ YLK++ +K +V+A YVYG+++ +      ++G+  L   +      +K+ +CR ++K
Sbjct: 130 GLSYLKQSAQKGYVDACYVYGVVMYA--ANLKEEGVEYLKMCEAKLG--NKMAECRRRVK 185

Query: 248 AIIREMWINNSISLIELRCKCQDRNVSC-IKKRK----FDEEEDVI---CCDACGWHREV 93
             +   WI N IS+ +  C     NV+C + +R     + +E+D      C+ C W  EV
Sbjct: 186 EFVWYFWIKNRISMSKEICS----NVNCKVNERSNGWDWKDEDDYYGEHTCEQCKWSNEV 241

Query: 92  ISFCKIV 72
           + FC ++
Sbjct: 242 LRFCNML 248


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