BLASTX nr result

ID: Atractylodes22_contig00031131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031131
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192153.1| phytochrome A-associated F-box protein [Arabido...    61   8e-08
ref|XP_002523077.1| Phytochrome A-associated F-box protein, puta...    60   2e-07
ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|AAM62754.1| unknown [Arabidopsis thaliana]                          59   4e-07
ref|XP_003521567.1| PREDICTED: phytochrome A-associated F-box pr...    59   4e-07

>ref|NP_192153.1| phytochrome A-associated F-box protein [Arabidopsis thaliana]
           gi|68052208|sp|Q8LEA8.2|EID1_ARATH RecName:
           Full=Phytochrome A-associated F-box protein; AltName:
           Full=Empfindlicher im dunkelroten Licht protein 1
           gi|3193286|gb|AAC19270.1| T14P8.22 [Arabidopsis
           thaliana] gi|7269004|emb|CAB80737.1| putative protein
           [Arabidopsis thaliana] gi|25083158|gb|AAN72049.1|
           putative protein [Arabidopsis thaliana]
           gi|30984562|gb|AAP42744.1| At4g02440 [Arabidopsis
           thaliana] gi|110739507|dbj|BAF01662.1| EID1 [Arabidopsis
           thaliana] gi|332656772|gb|AEE82172.1| phytochrome
           A-associated F-box protein [Arabidopsis thaliana]
          Length = 336

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 160 AEHVFSYLSDDVVLNIFFKLVDDPRNWSSLACVCTK 267
           AE VFS + +DVV NIFFKL DDPRNW+ LACVCTK
Sbjct: 2   AESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTK 37


>ref|XP_002523077.1| Phytochrome A-associated F-box protein, putative [Ricinus communis]
           gi|223537639|gb|EEF39262.1| Phytochrome A-associated
           F-box protein, putative [Ricinus communis]
          Length = 332

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 169 VFSYLSDDVVLNIFFKLVDDPRNWSSLACVCTK 267
           +FS L+DD+VL IFFKL DDPRNW+ LACVCTK
Sbjct: 6   IFSKLADDIVLTIFFKLEDDPRNWARLACVCTK 38


>ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|222844435|gb|EEE81982.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = +1

Query: 145 MSETEAEHVFSYLSDDVVLNIFFKLVDDPRNWSSLACVCTK 267
           M+ET     FS LSDDVVLNIF KL DDPRNW+ LACVCTK
Sbjct: 1   MTETTG---FSKLSDDVVLNIFSKLEDDPRNWARLACVCTK 38


>gb|AAM62754.1| unknown [Arabidopsis thaliana]
          Length = 337

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +1

Query: 160 AEHVFSYLSDDVVLNIFFKLVDDPRNWSSLACVCTK 267
           AE VFS + +DVV  IFFKL DDPRNW+ LACVCTK
Sbjct: 2   AESVFSCIPEDVVFKIFFKLQDDPRNWARLACVCTK 37


>ref|XP_003521567.1| PREDICTED: phytochrome A-associated F-box protein-like [Glycine
           max]
          Length = 327

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/35 (68%), Positives = 32/35 (91%)
 Frame = +1

Query: 163 EHVFSYLSDDVVLNIFFKLVDDPRNWSSLACVCTK 267
           +++FS L+DD+VLNIF+KL DDPR+W+ LACVCTK
Sbjct: 9   KNLFSELTDDIVLNIFYKLEDDPRHWARLACVCTK 43


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