BLASTX nr result

ID: Atractylodes22_contig00031101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031101
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD22389.1| F-box family protein-like [Oryza sativa Japonica...    74   2e-11
ref|NP_001173204.1| Os02g0813133 [Oryza sativa Japonica Group] g...    74   2e-11
ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002279225.1| PREDICTED: F-box protein PP2-B15-like [Vitis...    68   9e-10
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...    67   2e-09

>dbj|BAD22389.1| F-box family protein-like [Oryza sativa Japonica Group]
          Length = 236

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 235 PQRRADGWMEIELGRFYSDEMD-GEVDMRFMETRELHWKSGLIVEGIDIRP 86
           PQ+RADGWME++LG  Y++E D GEV + FMET+  HWKSGL+V+GI+IRP
Sbjct: 145 PQKRADGWMELKLGELYNEEGDDGEVCISFMETKGGHWKSGLVVQGIEIRP 195


>ref|NP_001173204.1| Os02g0813133 [Oryza sativa Japonica Group]
           gi|255671347|dbj|BAH91933.1| Os02g0813133 [Oryza sativa
           Japonica Group]
          Length = 472

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 235 PQRRADGWMEIELGRFYSDEMD-GEVDMRFMETRELHWKSGLIVEGIDIRP 86
           PQ+RADGWME++LG  Y++E D GEV + FMET+  HWKSGL+V+GI+IRP
Sbjct: 198 PQKRADGWMELKLGELYNEEGDDGEVCISFMETKGGHWKSGLVVQGIEIRP 248



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
 Frame = -1

Query: 238 VPQRRADGWMEIELGRFYSDE--MDGEVDMRFMETRELHWKS--GLIVEGIDIRP 86
           +PQ RADGWME+ELG FY+ E    GEV    ++ +   W S  GL+++GI+IRP
Sbjct: 415 LPQERADGWMELELGEFYNQEGNNQGEVCFSLVKPKAGRWLSNGGLVIQGIEIRP 469


>ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|222857349|gb|EEE94896.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = -1

Query: 244 GAVPQRRADGWMEIELGRFYSDEMDGEVDMRFMETRELHWKSGLIVEGIDIRP 86
           G VP  R DGW+EIELG F+S E D EV M  ME +  H K GLI+EGI+IRP
Sbjct: 233 GRVPSERDDGWLEIELGEFFSGENDEEVKMSLMEVKGHHLKGGLIIEGIEIRP 285


>ref|XP_002279225.1| PREDICTED: F-box protein PP2-B15-like [Vitis vinifera]
          Length = 277

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/53 (58%), Positives = 36/53 (67%)
 Frame = -1

Query: 238 VPQRRADGWMEIELGRFYSDEMDGEVDMRFMETRELHWKSGLIVEGIDIRPTD 80
           VP  R DGW E+ELG FY+D  D EV M   E + +H K GLIVEGI+IRP D
Sbjct: 225 VPHEREDGWFEVELGEFYNDGGDEEVKMSLREVKGVHLKGGLIVEGIEIRPKD 277


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -1

Query: 244 GAVPQRRADGWMEIELGRFYSDE-MDGEVDMRFMETRELHWKSGLIVEGIDIRPTDG 77
           G  P+ R DGW+EIELG F+  E  DGE++MR  E +   WK GL VEGI+IRP +G
Sbjct: 236 GQHPKERGDGWLEIELGEFFCKEGEDGELEMRVQEVKSGDWKGGLTVEGIEIRPKEG 292


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