BLASTX nr result

ID: Atractylodes22_contig00031011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031011
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        107   2e-22
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]   100   1e-19
emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]   100   1e-19
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]   100   1e-19
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]   100   1e-19

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  107 bits (267), Expect(2) = 2e-22
 Identities = 48/75 (64%), Positives = 59/75 (78%)
 Frame = -2

Query: 346  LHCDSEATLSRAYNKIYNEKSRHIGLRHAYVKQLISDGIITVIYIHSCKNLADPFTKGLP 167
            ++CDSEATLS+ YN +YN  SRHIGLRH YV+QL+  G I V+Y+ + KNLADPFTK L 
Sbjct: 1283 MYCDSEATLSKVYNAVYNGGSRHIGLRHNYVRQLLESGTIKVVYVKTSKNLADPFTKPLT 1342

Query: 166  RDMISETTRDMGLKP 122
            RD++  T RDMGLKP
Sbjct: 1343 RDLVVNTARDMGLKP 1357



 Score = 23.5 bits (49), Expect(2) = 2e-22
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 396  NMLLDLELWPQPMPAI 349
            ++L D+ LW  PMP I
Sbjct: 1266 DLLTDIRLWDVPMPCI 1281


>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
          Length = 1236

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = -2

Query: 346  LHCDSEATLSRAYNKIYNEKSRHIGLRHAYVKQLISDGIITVIYIHSCKNLADPFTKGLP 167
            +HCDS+ATL+RAY+ +YN KSRHI +RH YV+QLI +GII++ ++ S  NLADPFTK L 
Sbjct: 1160 IHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLT 1219

Query: 166  RDMISETTRDMGLK 125
            RD++  T+R MGLK
Sbjct: 1220 RDLVRITSRGMGLK 1233


>emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]
          Length = 1136

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = -2

Query: 346  LHCDSEATLSRAYNKIYNEKSRHIGLRHAYVKQLISDGIITVIYIHSCKNLADPFTKGLP 167
            +HCDS+ATL+RAY+ +YN KSRHI +RH YV+QLI +GII++ ++ S  NLADPFTK L 
Sbjct: 1060 IHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLT 1119

Query: 166  RDMISETTRDMGLK 125
            RD++  T+R MGLK
Sbjct: 1120 RDLVRITSRGMGLK 1133


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = -2

Query: 346  LHCDSEATLSRAYNKIYNEKSRHIGLRHAYVKQLISDGIITVIYIHSCKNLADPFTKGLP 167
            +HCDS+ATL+RAY+ +YN KSRHI +RH YV+QLI +GII++ ++ S  NLADPFTK L 
Sbjct: 1029 IHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLT 1088

Query: 166  RDMISETTRDMGLK 125
            RD++  T+R MGLK
Sbjct: 1089 RDLVRITSRGMGLK 1102


>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = -2

Query: 346  LHCDSEATLSRAYNKIYNEKSRHIGLRHAYVKQLISDGIITVIYIHSCKNLADPFTKGLP 167
            +HCDS+ATL+RAY+ +YN KSRHI +RH YV+QLI +GII++ ++ S  NLADPFTK L 
Sbjct: 1158 IHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLT 1217

Query: 166  RDMISETTRDMGLK 125
            RD++  T+R MGLK
Sbjct: 1218 RDLVRITSRGMGLK 1231


Top