BLASTX nr result

ID: Atractylodes22_contig00030956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030956
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33842.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    103   1e-20
ref|XP_004164396.1| PREDICTED: U-box domain-containing protein 1...    99   5e-19
ref|XP_004135239.1| PREDICTED: U-box domain-containing protein 1...    99   5e-19
ref|XP_002321584.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002525345.1| Spotted leaf protein, putative [Ricinus comm...    97   2e-18

>gb|ADN33842.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 671

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/102 (50%), Positives = 74/102 (72%)
 Frame = -2

Query: 308 VALDVLPLDSIDVSVELKELVGLVRKQAFDSKLGFRPEDKRILEHLKSILEQLEHQIAPD 129
           +AL++LPL+S+DVSV++ + V LV KQA   K G   ED+ I+  +KSIL   +++I PD
Sbjct: 122 LALEILPLNSMDVSVDVVDYVELVIKQARREKFGNDGEDEEIVNEVKSILSLFDNRIVPD 181

Query: 128 SNNLIRVLDYLGISSWSECNKEIKFLDSEIGSERSTTRKTDL 3
           ++ + RVLDY+G+ SWS CNKE+KFLDSEI  E S   KT++
Sbjct: 182 NSRIKRVLDYIGVKSWSLCNKEVKFLDSEIEFEWSNQDKTEV 223


>ref|XP_004164396.1| PREDICTED: U-box domain-containing protein 19-like [Cucumis
           sativus]
          Length = 683

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/102 (49%), Positives = 71/102 (69%)
 Frame = -2

Query: 308 VALDVLPLDSIDVSVELKELVGLVRKQAFDSKLGFRPEDKRILEHLKSILEQLEHQIAPD 129
           +AL++ PLDS+ VSV++ E V LV KQ   +K G   ED+ IL  +KSIL   +++I P+
Sbjct: 134 LALEIFPLDSMGVSVDVVEYVELVIKQTRRAKFGIEGEDEEILNEVKSILTLFDNRIVPN 193

Query: 128 SNNLIRVLDYLGISSWSECNKEIKFLDSEIGSERSTTRKTDL 3
           S+ +  VLDY+G+ SWS CNKE+KFLDSEI  E S   +T++
Sbjct: 194 SSKIKCVLDYIGVKSWSLCNKEVKFLDSEIEFEWSNQDETEV 235


>ref|XP_004135239.1| PREDICTED: U-box domain-containing protein 19-like [Cucumis
           sativus]
          Length = 683

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/102 (49%), Positives = 71/102 (69%)
 Frame = -2

Query: 308 VALDVLPLDSIDVSVELKELVGLVRKQAFDSKLGFRPEDKRILEHLKSILEQLEHQIAPD 129
           +AL++ PLDS+ VSV++ E V LV KQ   +K G   ED+ IL  +KSIL   +++I P+
Sbjct: 134 LALEIFPLDSMGVSVDVVEYVELVIKQTRRAKFGIEGEDEEILNEVKSILTLFDNRIVPN 193

Query: 128 SNNLIRVLDYLGISSWSECNKEIKFLDSEIGSERSTTRKTDL 3
           S+ +  VLDY+G+ SWS CNKE+KFLDSEI  E S   +T++
Sbjct: 194 SSKIKCVLDYIGVKSWSLCNKEVKFLDSEIEFEWSNQDETEV 235


>ref|XP_002321584.1| predicted protein [Populus trichocarpa] gi|222868580|gb|EEF05711.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/101 (50%), Positives = 72/101 (71%)
 Frame = -2

Query: 305 ALDVLPLDSIDVSVELKELVGLVRKQAFDSKLGFRPEDKRILEHLKSILEQLEHQIAPDS 126
           ALDVLPL  IDV VE+KELV LV KQA ++K+   PED+  L+ + SIL+  E    PDS
Sbjct: 134 ALDVLPLSLIDVGVEVKELVELVGKQARNAKVEVDPEDEWALKQVFSILDHFEKGTEPDS 193

Query: 125 NNLIRVLDYLGISSWSECNKEIKFLDSEIGSERSTTRKTDL 3
           + + RVLD+L I +W++CNKEIKFL+ +IG + S  ++ ++
Sbjct: 194 SFMKRVLDHLEIRNWNDCNKEIKFLEEQIGFQCSDCKEREV 234


>ref|XP_002525345.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223535308|gb|EEF36983.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 621

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/97 (46%), Positives = 68/97 (70%)
 Frame = -2

Query: 302 LDVLPLDSIDVSVELKELVGLVRKQAFDSKLGFRPEDKRILEHLKSILEQLEHQIAPDSN 123
           LDVLPL  I+V  E++EL+ LV  QA  ++    P+DKR++E + SIL Q E+ + PD +
Sbjct: 68  LDVLPLGLIEVPSEVRELIELVIIQARKARFEVDPDDKRVMEDVISILNQFENDVIPDRS 127

Query: 122 NLIRVLDYLGISSWSECNKEIKFLDSEIGSERSTTRK 12
           ++ +VLDY+G+  WS+CNKE+K LD+EIG + +   K
Sbjct: 128 DIKKVLDYVGVQEWSDCNKEVKLLDAEIGFDYANVEK 164


Top