BLASTX nr result

ID: Atractylodes22_contig00030905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030905
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea ma...   139   2e-31
ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   132   3e-29
dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]    132   3e-29
ref|XP_002303905.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   130   1e-28

>ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
           gi|238006636|gb|ACR34353.1| unknown [Zea mays]
           gi|414591099|tpg|DAA41670.1| TPA: ubiquitin
           carboxyl-terminal hydrolase [Zea mays]
          Length = 552

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = -3

Query: 271 SVVKARGNKASATVQPFLLLHLDISHEAVATIEDALRLYSMPETLDGYRTTSGKAGVVTA 92
           SVVKA GNKASATVQPFLLLHLDI  +AV T+ DALRL+S PE+L+GYRTT+GKAG+VTA
Sbjct: 378 SVVKAAGNKASATVQPFLLLHLDIFPDAVQTLNDALRLFSTPESLEGYRTTAGKAGLVTA 437

Query: 91  RKSVNLQTLPKIMVLHLKRFGYGTNGSTKL 2
           RKS  +  LPKIM+LHLKRF YG NGSTK+
Sbjct: 438 RKSFKIHALPKIMILHLKRFSYGNNGSTKI 467


>ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 530

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/91 (73%), Positives = 80/91 (87%), Gaps = 1/91 (1%)
 Frame = -3

Query: 271 SVVKARGNKASATVQPFLLLHLDISHEAVATIEDALRLYSMPETLDGYRTT-SGKAGVVT 95
           S+V+A+GN+ASATVQP+LLLHLDI  +AV TIEDAL L+S PETL+GYRT+ + KAGVVT
Sbjct: 355 SLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPETLEGYRTSLTAKAGVVT 414

Query: 94  ARKSVNLQTLPKIMVLHLKRFGYGTNGSTKL 2
           ARKSV + TLPKIM+LHL RFGYG+ GSTKL
Sbjct: 415 ARKSVQIVTLPKIMILHLMRFGYGSQGSTKL 445


>dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 739

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/90 (73%), Positives = 75/90 (83%)
 Frame = -3

Query: 271 SVVKARGNKASATVQPFLLLHLDISHEAVATIEDALRLYSMPETLDGYRTTSGKAGVVTA 92
           SVVKA GNKASATVQPFLLLHLDI  +AV T++DAL L+S PE+L+GYRTT+GKAGVVTA
Sbjct: 565 SVVKAAGNKASATVQPFLLLHLDIFPDAVQTLDDALHLFSTPESLEGYRTTAGKAGVVTA 624

Query: 91  RKSVNLQTLPKIMVLHLKRFGYGTNGSTKL 2
           RKS  +  L KIM+LHLKRF YG  G TKL
Sbjct: 625 RKSFKIHELSKIMILHLKRFSYGNRGCTKL 654


>ref|XP_002303905.1| predicted protein [Populus trichocarpa] gi|222841337|gb|EEE78884.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  131 bits (330), Expect = 5e-29
 Identities = 68/91 (74%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
 Frame = -3

Query: 271 SVVKARGNKASATVQPFLLLHLDISHEAVATIEDALRLYSMPETLDGYRTTS-GKAGVVT 95
           SVVKARGNKASATVQPFLLLHLDI  E V TIEDAL L+S PE L+GYRT++ GK+GVVT
Sbjct: 120 SVVKARGNKASATVQPFLLLHLDIHLEVVRTIEDALHLFSAPENLEGYRTSAIGKSGVVT 179

Query: 94  ARKSVNLQTLPKIMVLHLKRFGYGTNGSTKL 2
           A+KSV +QTL KIM+LHL RF YG+ GS KL
Sbjct: 180 AKKSVKIQTLSKIMILHLMRFSYGSQGSAKL 210


>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 532

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/91 (72%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
 Frame = -3

Query: 271 SVVKARGNKASATVQPFLLLHLDISHEAVATIEDALRLYSMPETLDGYRTT-SGKAGVVT 95
           S+V+A+GN+ASATVQP+LLLHLDI  +AV TIEDAL L+S PETL+GYRT+ + KAGVVT
Sbjct: 357 SLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPETLEGYRTSLTAKAGVVT 416

Query: 94  ARKSVNLQTLPKIMVLHLKRFGYGTNGSTKL 2
           ARKSV + TLPKIM+LHL RFGYG+ GS KL
Sbjct: 417 ARKSVRIVTLPKIMILHLMRFGYGSQGSIKL 447


Top