BLASTX nr result

ID: Atractylodes22_contig00030885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030885
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49
gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like pr...   196   1e-48
emb|CBI29839.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   196   2e-48
ref|XP_002308947.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48

>ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|222867347|gb|EEF04478.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  197 bits (502), Expect = 6e-49
 Identities = 97/112 (86%), Positives = 104/112 (92%)
 Frame = +1

Query: 136 DLSSEMEVDAFRRLFPLRFHERHLLESVRPDARPLGKARETTLALGAVGSADGSALAKIG 315
           DLSSEMEVDAFR LFPLR+ ERHL ES+RPDARPLG+AR+TTLALGAV SA GSALAKIG
Sbjct: 9   DLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68

Query: 316 CTTMLAAIKMEVMTPVTEAPDEGCVAIDFHMPAICSPIVRPGRPAEAAPVVS 471
            TTMLAAIKMEVMTP TE+PDEGC+AIDFHMP ICSPIVRPGRPAEAAPV+S
Sbjct: 69  STTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVIS 120


>gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
           tuberosum]
          Length = 314

 Score =  196 bits (499), Expect = 1e-48
 Identities = 97/118 (82%), Positives = 106/118 (89%)
 Frame = +1

Query: 118 SANGVTDLSSEMEVDAFRRLFPLRFHERHLLESVRPDARPLGKARETTLALGAVGSADGS 297
           +ANG +DLSSEMEVDAFRRLFPLR+HE HLL+SVRPDAR LG AR+TTLALGAV SADGS
Sbjct: 3   AANGSSDLSSEMEVDAFRRLFPLRYHEHHLLKSVRPDARKLGSARDTTLALGAVASADGS 62

Query: 298 ALAKIGCTTMLAAIKMEVMTPVTEAPDEGCVAIDFHMPAICSPIVRPGRPAEAAPVVS 471
           ALAKIG TTMLAAIKMEVMTP  E PDEG +AI+FHMP ICSP+VRPGRPAEAA V+S
Sbjct: 63  ALAKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVIS 120


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/118 (81%), Positives = 108/118 (91%)
 Frame = +1

Query: 118 SANGVTDLSSEMEVDAFRRLFPLRFHERHLLESVRPDARPLGKARETTLALGAVGSADGS 297
           SAN   DLSSEMEVDAFRRLFPLR+HER LL+S+RPDARPLG+AR+T+LALGAV SADGS
Sbjct: 3   SANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGS 62

Query: 298 ALAKIGCTTMLAAIKMEVMTPVTEAPDEGCVAIDFHMPAICSPIVRPGRPAEAAPVVS 471
           ALAKIGCTTMLAA+KMEVMTP  E+PDEG +AI+F+MP ICSP+VRPGRPAE APVVS
Sbjct: 63  ALAKIGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVS 120


>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/118 (81%), Positives = 108/118 (91%)
 Frame = +1

Query: 118 SANGVTDLSSEMEVDAFRRLFPLRFHERHLLESVRPDARPLGKARETTLALGAVGSADGS 297
           SAN   DLSSEMEVDAFRRLFPLR+HER LL+S+RPDARPLG+AR+T+LALGAV SADGS
Sbjct: 3   SANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGS 62

Query: 298 ALAKIGCTTMLAAIKMEVMTPVTEAPDEGCVAIDFHMPAICSPIVRPGRPAEAAPVVS 471
           ALAKIGCTTMLAA+KMEVMTP  E+PDEG +AI+F+MP ICSP+VRPGRPAE APVVS
Sbjct: 63  ALAKIGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVS 120


>ref|XP_002308947.1| predicted protein [Populus trichocarpa] gi|222854923|gb|EEE92470.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  194 bits (493), Expect = 6e-48
 Identities = 96/112 (85%), Positives = 104/112 (92%)
 Frame = +1

Query: 136 DLSSEMEVDAFRRLFPLRFHERHLLESVRPDARPLGKARETTLALGAVGSADGSALAKIG 315
           DLSSEMEVDAFRRLFPLR+ ERHL ES+RPDARPLG+AR+TTLALGAV SA GSALAKIG
Sbjct: 9   DLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68

Query: 316 CTTMLAAIKMEVMTPVTEAPDEGCVAIDFHMPAICSPIVRPGRPAEAAPVVS 471
            TTMLAAIKMEVMTP TE+P+EG +AIDFHMP ICSPIVRPGRPAEAAPV+S
Sbjct: 69  STTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVIS 120


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