BLASTX nr result

ID: Atractylodes22_contig00030879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030879
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   605   e-171
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   595   e-168
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   595   e-168
ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor...   585   e-165
dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare]    585   e-165

>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  605 bits (1561), Expect = e-171
 Identities = 293/343 (85%), Positives = 314/343 (91%)
 Frame = +2

Query: 2    SYNPRTGMESLLITPISKASANQRAGRSGRTGPGKCFRLYTAYNYFNDLDDNTVPEIQRT 181
            SYNPRTGMESLL+ PISKASA QRAGRSGRTGPGKCFRLYTAYNY+NDL+DNTVPEIQRT
Sbjct: 714  SYNPRTGMESLLVNPISKASAMQRAGRSGRTGPGKCFRLYTAYNYYNDLEDNTVPEIQRT 773

Query: 182  NLANVVLSLKSLGIHDLLNFDFMDPPPXXXXXXXXXXXXXXXXXNKHGELTKVGRKMAEF 361
            NLANVVLSLKSLGIHDLLNFDFMDPPP                 N+ GELTKVGR+MAEF
Sbjct: 774  NLANVVLSLKSLGIHDLLNFDFMDPPPAEALLKALELLYALSALNRLGELTKVGRRMAEF 833

Query: 362  PLDPMLSKMIVASDKYKCSDEIISIAAMLSIGSSIFYRPKDKQVHADNARLNFHMGNVGD 541
            PLDPMLSKMIVA+D YKCSDEIISIAAMLS+G+SIFYRPKDKQVHADNAR+NFH GNVGD
Sbjct: 834  PLDPMLSKMIVAADNYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGD 893

Query: 542  HIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELVSNPGDLE 721
            HIALLKVYSSWKETN+STQWCYENYIQVRSMKRARD+RDQLEGLLERVEIEL SNP DL+
Sbjct: 894  HIALLKVYSSWKETNYSTQWCYENYIQVRSMKRARDVRDQLEGLLERVEIELASNPNDLD 953

Query: 722  AIKKAITSGYFPHSARMQKNGSYRTVKHPQTVYIHPSSGLAQVLPKWVVYHELVLTTKEY 901
            AIKK+IT+G+FPHSAR+QKNGSYRTVKHPQTV+IHPSSGLAQVLP+WV+YHELVLTTKEY
Sbjct: 954  AIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVIYHELVLTTKEY 1013

Query: 902  MRQVSELKPEWLVEIAPHYYQLKDVEDLAPKKMPRGEGRATKD 1030
            MRQV+ELKPEWLVEIAPH+YQLKDVED   KKMPR EGRA KD
Sbjct: 1014 MRQVTELKPEWLVEIAPHFYQLKDVEDPGSKKMPRTEGRAVKD 1056


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  595 bits (1534), Expect = e-168
 Identities = 291/338 (86%), Positives = 308/338 (91%)
 Frame = +2

Query: 2    SYNPRTGMESLLITPISKASANQRAGRSGRTGPGKCFRLYTAYNYFNDLDDNTVPEIQRT 181
            SYNPRTGMESLL+TPISKASANQRAGRSGRTGPGKCFRLYTAYNY NDLDDNTVPEIQRT
Sbjct: 695  SYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQRT 754

Query: 182  NLANVVLSLKSLGIHDLLNFDFMDPPPXXXXXXXXXXXXXXXXXNKHGELTKVGRKMAEF 361
            NLANVVL+LKSLGIHDLLNFDFMDPPP                 NK GELTKVGR+MAEF
Sbjct: 755  NLANVVLTLKSLGIHDLLNFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEF 814

Query: 362  PLDPMLSKMIVASDKYKCSDEIISIAAMLSIGSSIFYRPKDKQVHADNARLNFHMGNVGD 541
            PLDPMLSKMIVAS+ YKCSD+IISIAAMLS+G+SIFYRPKDKQVHADNARLNFH GNVGD
Sbjct: 815  PLDPMLSKMIVASENYKCSDDIISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGD 874

Query: 542  HIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELVSNPGDLE 721
            H+ALLKVY+SWKETN+STQWCYENYIQVRSMKRARDIRDQL GLLERVEIEL SN  DL+
Sbjct: 875  HMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTSNANDLD 934

Query: 722  AIKKAITSGYFPHSARMQKNGSYRTVKHPQTVYIHPSSGLAQVLPKWVVYHELVLTTKEY 901
            AIKK+ITSG+FPHSAR+QKNGSYRTVKH QTV+IHPSSGLAQVLP+WVVYHELVLTTKEY
Sbjct: 935  AIKKSITSGFFPHSARLQKNGSYRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVLTTKEY 994

Query: 902  MRQVSELKPEWLVEIAPHYYQLKDVEDLAPKKMPRGEG 1015
            MRQV+ELKPEWLVEIAPHYYQLKDVED   KKMPRG G
Sbjct: 995  MRQVTELKPEWLVEIAPHYYQLKDVEDSYSKKMPRGAG 1032


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  595 bits (1534), Expect = e-168
 Identities = 291/338 (86%), Positives = 308/338 (91%)
 Frame = +2

Query: 2    SYNPRTGMESLLITPISKASANQRAGRSGRTGPGKCFRLYTAYNYFNDLDDNTVPEIQRT 181
            SYNPRTGMESLL+TPISKASANQRAGRSGRTGPGKCFRLYTAYNY NDLDDNTVPEIQRT
Sbjct: 704  SYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQRT 763

Query: 182  NLANVVLSLKSLGIHDLLNFDFMDPPPXXXXXXXXXXXXXXXXXNKHGELTKVGRKMAEF 361
            NLANVVL+LKSLGIHDLLNFDFMDPPP                 NK GELTKVGR+MAEF
Sbjct: 764  NLANVVLTLKSLGIHDLLNFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEF 823

Query: 362  PLDPMLSKMIVASDKYKCSDEIISIAAMLSIGSSIFYRPKDKQVHADNARLNFHMGNVGD 541
            PLDPMLSKMIVAS+ YKCSD+IISIAAMLS+G+SIFYRPKDKQVHADNARLNFH GNVGD
Sbjct: 824  PLDPMLSKMIVASENYKCSDDIISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGD 883

Query: 542  HIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELVSNPGDLE 721
            H+ALLKVY+SWKETN+STQWCYENYIQVRSMKRARDIRDQL GLLERVEIEL SN  DL+
Sbjct: 884  HMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTSNANDLD 943

Query: 722  AIKKAITSGYFPHSARMQKNGSYRTVKHPQTVYIHPSSGLAQVLPKWVVYHELVLTTKEY 901
            AIKK+ITSG+FPHSAR+QKNGSYRTVKH QTV+IHPSSGLAQVLP+WVVYHELVLTTKEY
Sbjct: 944  AIKKSITSGFFPHSARLQKNGSYRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVLTTKEY 1003

Query: 902  MRQVSELKPEWLVEIAPHYYQLKDVEDLAPKKMPRGEG 1015
            MRQV+ELKPEWLVEIAPHYYQLKDVED   KKMPRG G
Sbjct: 1004 MRQVTELKPEWLVEIAPHYYQLKDVEDSYSKKMPRGAG 1041


>ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Brachypodium distachyon]
          Length = 1051

 Score =  585 bits (1509), Expect = e-165
 Identities = 282/340 (82%), Positives = 309/340 (90%)
 Frame = +2

Query: 2    SYNPRTGMESLLITPISKASANQRAGRSGRTGPGKCFRLYTAYNYFNDLDDNTVPEIQRT 181
            SYNPRTGMESLLI PISKASANQRAGRSGRTGPGKCFRLYT+YNY +DL+DNTVPEIQRT
Sbjct: 710  SYNPRTGMESLLINPISKASANQRAGRSGRTGPGKCFRLYTSYNYMHDLEDNTVPEIQRT 769

Query: 182  NLANVVLSLKSLGIHDLLNFDFMDPPPXXXXXXXXXXXXXXXXXNKHGELTKVGRKMAEF 361
            NLANVVL+LKSLGIHDL+NFDFMDPPP                 N  GELTK GR+MAEF
Sbjct: 770  NLANVVLTLKSLGIHDLVNFDFMDPPPSEALLKALEQLFALSALNSRGELTKTGRRMAEF 829

Query: 362  PLDPMLSKMIVASDKYKCSDEIISIAAMLSIGSSIFYRPKDKQVHADNARLNFHMGNVGD 541
            PLDPMLSKMIVAS+KYKCSDE+ISIA+MLSIG+SIFYRPKDKQVHADNARLNFH GNVGD
Sbjct: 830  PLDPMLSKMIVASEKYKCSDEVISIASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGD 889

Query: 542  HIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELVSNPGDLE 721
            HIALL VY+SWKET+FSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIE+ SN  DL+
Sbjct: 890  HIALLNVYNSWKETDFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVCSNASDLD 949

Query: 722  AIKKAITSGYFPHSARMQKNGSYRTVKHPQTVYIHPSSGLAQVLPKWVVYHELVLTTKEY 901
            AIKKAITSG+F HSAR+QKNGSYRTVK+PQTV++HPSSGLAQ+LP+WV+YHELVLTTKEY
Sbjct: 950  AIKKAITSGFFHHSARLQKNGSYRTVKNPQTVFVHPSSGLAQLLPRWVIYHELVLTTKEY 1009

Query: 902  MRQVSELKPEWLVEIAPHYYQLKDVEDLAPKKMPRGEGRA 1021
            MRQV+ELKPEWLVEIAPHYYQLKDV+D   KK+P+G+GRA
Sbjct: 1010 MRQVTELKPEWLVEIAPHYYQLKDVDDSGSKKLPKGQGRA 1049


>dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1046

 Score =  585 bits (1507), Expect = e-165
 Identities = 281/340 (82%), Positives = 310/340 (91%)
 Frame = +2

Query: 2    SYNPRTGMESLLITPISKASANQRAGRSGRTGPGKCFRLYTAYNYFNDLDDNTVPEIQRT 181
            SYNPRTGMESLLI PISKASANQRAGRSGRTGPGKCFRLYT+YNY +DL+DNTVPEIQRT
Sbjct: 705  SYNPRTGMESLLINPISKASANQRAGRSGRTGPGKCFRLYTSYNYMHDLEDNTVPEIQRT 764

Query: 182  NLANVVLSLKSLGIHDLLNFDFMDPPPXXXXXXXXXXXXXXXXXNKHGELTKVGRKMAEF 361
            NLANVVL+LKSLGIHDL+NFDFMDPPP                 N  GELTK GR+MAEF
Sbjct: 765  NLANVVLTLKSLGIHDLVNFDFMDPPPSEALLKALEQLFALSALNSRGELTKTGRRMAEF 824

Query: 362  PLDPMLSKMIVASDKYKCSDEIISIAAMLSIGSSIFYRPKDKQVHADNARLNFHMGNVGD 541
            PLDPMLSKMIVAS+KYKCSDE++SIA+MLSIG+SIFYRPKDKQVHADNARLNFH GNVGD
Sbjct: 825  PLDPMLSKMIVASEKYKCSDEVMSIASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGD 884

Query: 542  HIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELVSNPGDLE 721
            HIALL VY+SW+ET+FSTQWCYENYIQVRSMKRARDIRDQLEGL+ERVEIE+ SN  DL+
Sbjct: 885  HIALLNVYNSWRETDFSTQWCYENYIQVRSMKRARDIRDQLEGLMERVEIEVCSNASDLD 944

Query: 722  AIKKAITSGYFPHSARMQKNGSYRTVKHPQTVYIHPSSGLAQVLPKWVVYHELVLTTKEY 901
            AIKKAITSG+F HSAR+QKNGSYRTVK+PQTV+IHPSSGLAQ+LP+WV+YHELVLTTKEY
Sbjct: 945  AIKKAITSGFFHHSARLQKNGSYRTVKNPQTVFIHPSSGLAQLLPRWVIYHELVLTTKEY 1004

Query: 902  MRQVSELKPEWLVEIAPHYYQLKDVEDLAPKKMPRGEGRA 1021
            MRQV+ELKPEWLVEIAPHYYQLKDV+D A KK+P+G+GRA
Sbjct: 1005 MRQVTELKPEWLVEIAPHYYQLKDVDDAASKKLPKGQGRA 1044


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