BLASTX nr result

ID: Atractylodes22_contig00030858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030858
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
dbj|BAF03493.1| Ku70 homolog [Populus nigra]                           81   1e-13
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...    80   2e-13
ref|NP_564012.1| ATP-dependent DNA helicase 2 subunit KU70 [Arab...    78   6e-13
ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subu...    75   6e-12

>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = -2

Query: 167 NDFYQERQTSKDLVVYLVDASPKMFSINCPGEDQKNASHFHVAVSCIAQFIKVQI 3
           ++FYQ+R++SK+ VVYLVDASPKMFS  CP ED K  +HFH+A+SCIAQ +K QI
Sbjct: 18  SEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFHIAISCIAQSLKTQI 72


>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = -2

Query: 167 NDFYQERQTSKDLVVYLVDASPKMFSINCPGEDQKNASHFHVAVSCIAQFIKVQI 3
           ++FYQ+R++SK+ VVYLVDASPKMFS  CP ED K  +HF +A+SCIAQ +K QI
Sbjct: 18  SEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFQIAISCIAQSLKTQI 72


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = -2

Query: 167 NDFYQERQTSKDLVVYLVDASPKMFSINCPGEDQKNASHFHVAVSCIAQFIKVQI 3
           +DFYQ+R++SK+ VVYLVDASPKMF+   P EDQK+ +HFH+AVS IAQ +K QI
Sbjct: 18  SDFYQQRESSKEFVVYLVDASPKMFTTTFPAEDQKDETHFHIAVSSIAQSLKTQI 72


>ref|NP_564012.1| ATP-dependent DNA helicase 2 subunit KU70 [Arabidopsis thaliana]
           gi|75309289|sp|Q9FQ08.1|KU70_ARATH RecName:
           Full=ATP-dependent DNA helicase 2 subunit KU70; AltName:
           Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
           Full=ATP-dependent DNA helicase II 70 kDa subunit
           gi|12006424|gb|AAG44852.1|AF283759_1 Ku70-like protein
           [Arabidopsis thaliana] gi|62320632|dbj|BAD95294.1|
           Ku70-like protein [Arabidopsis thaliana]
           gi|332191406|gb|AEE29527.1| ATP-dependent DNA helicase 2
           subunit KU70 [Arabidopsis thaliana]
          Length = 621

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = -2

Query: 167 NDFYQERQTSKDLVVYLVDASPKMFSINCPGEDQ-KNASHFHVAVSCIAQFIKVQI 3
           NDF+QE++ SK+ VVYL+DASPKMF   CP E++ K  SHFH+AVSCIAQ +K  I
Sbjct: 18  NDFFQEKEASKEFVVYLIDASPKMFCSTCPSEEEDKQESHFHIAVSCIAQSLKAHI 73


>ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
           sativus]
          Length = 625

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/55 (60%), Positives = 44/55 (80%)
 Frame = -2

Query: 167 NDFYQERQTSKDLVVYLVDASPKMFSINCPGEDQKNASHFHVAVSCIAQFIKVQI 3
           N F+QER+++K+L VYLVDASPKMF+  C  ED+K  +HF VA+SCI+Q +K QI
Sbjct: 18  NPFFQERESTKELAVYLVDASPKMFTTTCLSEDKKEETHFQVALSCISQSLKTQI 72


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