BLASTX nr result

ID: Atractylodes22_contig00030720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030720
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   161   4e-38
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   161   4e-38
gb|ABK95931.1| unknown [Populus trichocarpa]                          151   6e-35
gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum t...   147   1e-33
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...   144   6e-33

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  161 bits (408), Expect = 4e-38
 Identities = 84/166 (50%), Positives = 99/166 (59%), Gaps = 7/166 (4%)
 Frame = +1

Query: 1   DVTTAAVAKDALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPESALLAMQHA 180
           DVTTAAVAK+ALEGHCIYDGGYCKLHLSYSRHTDLNVKA SD+SRDYT+P+S LLA+Q A
Sbjct: 262 DVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQA 321

Query: 181 SGLPAGALVWQTPQAGQMXXXXXXXXXXXXXXXXXXXXXXXXXWDPNKQGARTNFVSAPA 360
            G P    VWQ PQA  +                         WDPN Q  R+ F SA +
Sbjct: 322 PGHPGATTVWQNPQAAPL---------YTGHDAAAAAAVQVPSWDPNMQAGRSTFASAAS 372

Query: 361 TFP--PYSPTGVG-----PSMRVAAAGQATNMRPGGASSPVQPPYY 477
            FP  P++ + +      P           N+RPGGAS P +PPY+
Sbjct: 373 AFPSQPFASSSISAYPAPPGSSPLTPAVPPNVRPGGASPPGRPPYF 418


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  161 bits (408), Expect = 4e-38
 Identities = 84/166 (50%), Positives = 99/166 (59%), Gaps = 7/166 (4%)
 Frame = +1

Query: 1   DVTTAAVAKDALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPESALLAMQHA 180
           DVTTAAVAK+ALEGHCIYDGGYCKLHLSYSRHTDLNVKA SD+SRDYT+P+S LLA+Q A
Sbjct: 291 DVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQA 350

Query: 181 SGLPAGALVWQTPQAGQMXXXXXXXXXXXXXXXXXXXXXXXXXWDPNKQGARTNFVSAPA 360
            G P    VWQ PQA  +                         WDPN Q  R+ F SA +
Sbjct: 351 PGHPGATTVWQNPQAAPL---------YTGHDAAAAAAVQVPSWDPNMQAGRSTFASAAS 401

Query: 361 TFP--PYSPTGVG-----PSMRVAAAGQATNMRPGGASSPVQPPYY 477
            FP  P++ + +      P           N+RPGGAS P +PPY+
Sbjct: 402 AFPSQPFASSSISAYPAPPGSSPLTPAVPPNVRPGGASPPGRPPYF 447


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  151 bits (381), Expect = 6e-35
 Identities = 84/185 (45%), Positives = 99/185 (53%), Gaps = 26/185 (14%)
 Frame = +1

Query: 1   DVTTAAVAKDALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPESALLAMQHA 180
           DV TAAVAK+ LEGHCIYDGGYCKLHLSYSRHTDLNVKA+SDKSRDYT+P+++L+A Q A
Sbjct: 291 DVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQ-A 349

Query: 181 SGLPAGALVWQTPQAGQMXXXXXXXXXXXXXXXXXXXXXXXXXWDPNKQGARTNFVSAPA 360
            GL     +WQ PQAG M                         WDP  Q     + S P 
Sbjct: 350 PGLHTAPTMWQNPQAGSM--YTGNNYATTAAVPVQVPPGQVPAWDPTMQAGGQGYASVPG 407

Query: 361 TFPPYS--------------PTGVGP------------SMRVAAAGQATNMRPGGASSPV 462
           T+P  +              P G  P            SM ++  G  +N+RP GAS P 
Sbjct: 408 TYPGQTYPTPPASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPGMQSNLRPSGASPPG 467

Query: 463 QPPYY 477
           QPPYY
Sbjct: 468 QPPYY 472


>gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
          Length = 467

 Score =  147 bits (370), Expect = 1e-33
 Identities = 83/165 (50%), Positives = 95/165 (57%), Gaps = 9/165 (5%)
 Frame = +1

Query: 1   DVTTAAVAKDALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPESALLAMQHA 180
           DVT AA AKDALEGHCIYDGGYCKLHLSYSRHTDLNV+A+SDKSRDYTVPES+LLAMQ A
Sbjct: 291 DVTIAAAAKDALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQA 350

Query: 181 SGLPAGALVWQTPQAGQMXXXXXXXXXXXXXXXXXXXXXXXXXWDPNKQGARTNFVSAPA 360
           S + A   VW  PQ+G +                         W+PN QG  + F SAP 
Sbjct: 351 SAVHATPPVWHNPQSGPV------QSSAGYATTGTVPGQAPPAWNPNLQGGGSTFPSAPT 404

Query: 361 TFPPYSPTGVGPSMRVA----AAGQATN-----MRPGGASSPVQP 468
            +P +S     P+   A     + Q TN      RP   S P QP
Sbjct: 405 GYPGHSYAPPAPAYATAVHPPGSSQQTNHISTGSRPFSVSQPFQP 449


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  144 bits (364), Expect = 6e-33
 Identities = 82/185 (44%), Positives = 100/185 (54%), Gaps = 26/185 (14%)
 Frame = +1

Query: 1   DVTTAAVAKDALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPESALLAMQHA 180
           DV TAAVAK+ LEGHCIYDGGYCKLHLSYSRHTDLNVKA+SDKSRDYT+P+++LLA    
Sbjct: 299 DVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAGQV 358

Query: 181 SGLPAGALVWQTPQAGQMXXXXXXXXXXXXXXXXXXXXXXXXXWDPNKQGARTNFVSA-P 357
            G+P    +WQ PQA  M                         W+P+ +     + S  P
Sbjct: 359 PGVPTAPTMWQNPQASPM--YPVNSYASAAAVTAQVPAGQVPAWNPSMEAGGPAYPSVPP 416

Query: 358 ATFPPYS-----PTGVGPSMRVAAA--------------------GQATNMRPGGASSPV 462
            TFP  S     PT V  +M V ++                    G  +N+RPGGAS P 
Sbjct: 417 GTFPGQSYPAPPPTYVSAAMPVGSSPLTQGSPMSPGVGTMPMTHPGVQSNLRPGGASPPG 476

Query: 463 QPPYY 477
           QPP+Y
Sbjct: 477 QPPFY 481


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