BLASTX nr result

ID: Atractylodes22_contig00030643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030643
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334150.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vi...    55   6e-06
ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vi...    55   8e-06
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...    55   8e-06
emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]    55   8e-06

>ref|XP_002334150.1| predicted protein [Populus trichocarpa] gi|222869839|gb|EEF06970.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = +1

Query: 7   CTNVESFSRNICALRCLRKLTLEG--DILESPKDLGQLQCLEKLTFGSTKIKHLPNSICT 180
           C N+ES   +IC L+ L+KL L G  ++   P++LG+++ LE+     T I+ LP S+  
Sbjct: 4   CKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPASLFL 63

Query: 181 LKNLKSLTVE 210
           LKNLK L+++
Sbjct: 64  LKNLKVLSLD 73


>ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = +1

Query: 7    CTNVESFSRNICALRCLRKLTLEG--DILESPKDLGQLQCLEKLTFGSTKIKHLPNSICT 180
            C ++ES  R+I  L+ L+ LTL G  ++ E P DLG LQCL +L    + I+ +P SI  
Sbjct: 787  CKSLESLPRSIFKLKSLKTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITL 846

Query: 181  LKNLKSLTVESC 216
            L NL+ L++  C
Sbjct: 847  LTNLQKLSLAGC 858


>ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +1

Query: 7   CTNVESFSRNICALRCLRKLTLEG--DILESPKDLGQLQCLEKLTFGSTKIKHLPNSICT 180
           C  + S  ++IC L  L+ LTL G   + + P DLG+LQCL +L    T IK +P+SI  
Sbjct: 762 CKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINL 821

Query: 181 LKNLKSLTVESC 216
           L NL+ L++  C
Sbjct: 822 LTNLQELSLAGC 833


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +1

Query: 7   CTNVESFSRNICALRCLRKLTLEG--DILESPKDLGQLQCLEKLTFGSTKIKHLPNSICT 180
           C+ +E+  ++IC L  L+ LTL G   + + P DLG+LQCL +L    T IK + +SI  
Sbjct: 678 CSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINL 737

Query: 181 LKNLKSLTVESC 216
           L NL++L++  C
Sbjct: 738 LTNLEALSLAGC 749


>emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +1

Query: 7   CTNVESFSRNICALRCLRKLTLEG--DILESPKDLGQLQCLEKLTFGSTKIKHLPNSICT 180
           C  + S  ++IC L  L+ LTL G   + + P DLG+LQCL +L    T IK +P+SI  
Sbjct: 730 CKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINL 789

Query: 181 LKNLKSLTVESC 216
           L NL+ L++  C
Sbjct: 790 LTNLQELSLAGC 801


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