BLASTX nr result

ID: Atractylodes22_contig00030605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030605
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]                       157   4e-58
gb|AAK54466.1| cyclin D3 [Helianthus annuus]                          122   8e-45
dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]                         111   1e-41
emb|CBI40278.3| unnamed protein product [Vitis vinifera]              110   2e-41
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]      107   1e-40

>gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]
          Length = 357

 Score =  157 bits (396), Expect(2) = 4e-58
 Identities = 89/134 (66%), Positives = 95/134 (70%), Gaps = 9/134 (6%)
 Frame = +3

Query: 159 MAILSPFSSSFLDTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSSHLHL---DQQDLFW 329
           MAILSP+SSSFLDTLFCNE+QD ++   H               SS LHL   DQ DL W
Sbjct: 1   MAILSPYSSSFLDTLFCNEQQDHEY---HEYEYEDEFTQTTLTDSSDLHLPPLDQLDLSW 57

Query: 330 EDEELVSLFTKEQEQQKLST------STDPYVFLARKEAVDWILKVKAHYGFTPLTAILA 491
           E EELVSLFTKEQEQQK +        T P VF ARKEAVDWILKVK+ YGFTPLTAILA
Sbjct: 58  EHEELVSLFTKEQEQQKQTPCTLSFGKTSPSVFAARKEAVDWILKVKSCYGFTPLTAILA 117

Query: 492 INYLDRFLSSLHFQ 533
           INYLDRFLSSLHFQ
Sbjct: 118 INYLDRFLSSLHFQ 131



 Score = 94.7 bits (234), Expect(2) = 4e-58
 Identities = 47/49 (95%), Positives = 49/49 (100%)
 Frame = +1

Query: 613 PWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQKMELL 759
           PWMIQLVAVSCLSLAAKVEET+VPLLLDLQVEDTK+LFEAKNIQKMELL
Sbjct: 135 PWMIQLVAVSCLSLAAKVEETQVPLLLDLQVEDTKYLFEAKNIQKMELL 183


>gb|AAK54466.1| cyclin D3 [Helianthus annuus]
          Length = 308

 Score =  122 bits (307), Expect(2) = 8e-45
 Identities = 77/128 (60%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
 Frame = +3

Query: 159 MAILSPFSSSFLDTLFCNEEQ--DRQWSLDHXXXXXXXXXXXXXXXSSHLH-LDQQDLFW 329
           MAILS +SSS  +TLFC EEQ  + +  L H               SS +H LD QDL W
Sbjct: 1   MAILSRYSSS--NTLFCIEEQVHEDEDELTHQD-------------SSAIHPLDLQDLCW 45

Query: 330 EDEELVSLFTKEQEQQKLSTSTDPYVFLARKEAVDWILKVKAHYGFTPLTAILAINYLDR 509
           E EELVSLFTKE+EQQK +          RKEAVDWILKVK  +GFTPLTAILAINYLDR
Sbjct: 46  EHEELVSLFTKEEEQQKQTPWPSSCTLSFRKEAVDWILKVKGCHGFTPLTAILAINYLDR 105

Query: 510 FLSSLHFQ 533
           FLSSLHFQ
Sbjct: 106 FLSSLHFQ 113



 Score = 84.3 bits (207), Expect(2) = 8e-45
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = +1

Query: 613 PWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQKMELL 759
           PWMI LVAV+CLSLAAK++ET VPLLLDLQ+E++KFLFEAKNIQK ELL
Sbjct: 118 PWMIHLVAVTCLSLAAKIQETHVPLLLDLQLEESKFLFEAKNIQKTELL 166


>dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]
          Length = 368

 Score =  111 bits (277), Expect(2) = 1e-41
 Identities = 64/119 (53%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = +3

Query: 183 SSFLDTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSSHLHLDQQDLFWEDEELVSLFTK 362
           S  LD L+C EE+  +   D                   L L +QDLFWEDEEL+SLFTK
Sbjct: 15  SFLLDALYCEEERWEETIEDEILEKEATLPLP-------LPLLEQDLFWEDEELLSLFTK 67

Query: 363 EQE--QQKLSTSTDPYVFLARKEAVDWILKVKAHYGFTPLTAILAINYLDRFLSSLHFQ 533
           E+E      +  TDP + L+RKEAV WILKV AHYGF+  TAILAINY DRFLSSLHFQ
Sbjct: 68  EKETISNFETIKTDPLLCLSRKEAVKWILKVNAHYGFSTFTAILAINYFDRFLSSLHFQ 126



 Score = 85.5 bits (210), Expect(2) = 1e-41
 Identities = 41/49 (83%), Positives = 46/49 (93%)
 Frame = +1

Query: 613 PWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQKMELL 759
           PWMIQLVAV+CLSLAAKVEET+VPLLLD QVED K++FEAK IQ+MELL
Sbjct: 130 PWMIQLVAVTCLSLAAKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELL 178


>emb|CBI40278.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  110 bits (274), Expect(2) = 2e-41
 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
 Frame = +3

Query: 174 PFSSSFL-DTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSSHLHLDQQDLFWEDEELVS 350
           P SSSFL D L+C EE+  +   D                   L L +QDLFWEDEEL+S
Sbjct: 15  PNSSSFLLDALYCEEERWEEEEEDECLQEEAYPSSTLLP----LLLLEQDLFWEDEELLS 70

Query: 351 LFTKEQEQQKLSTST---DPYVFLARKEAVDWILKVKAHYGFTPLTAILAINYLDRFLSS 521
           LF+KE++Q  L       D  + +AR++AV+W++KV AHYGF+ +TAILAINYLDRFLSS
Sbjct: 71  LFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAINYLDRFLSS 130

Query: 522 LHFQ 533
           LHFQ
Sbjct: 131 LHFQ 134



 Score = 85.9 bits (211), Expect(2) = 2e-41
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = +1

Query: 613 PWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQKMELL 759
           PWMIQL AV+CLSLAAKVEET+VPLLLDLQVED+K++FEAK IQ+MELL
Sbjct: 138 PWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELL 186


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score =  107 bits (267), Expect(2) = 1e-40
 Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 12/132 (9%)
 Frame = +3

Query: 174 PFSSSFL-DTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSS--------HLHLDQQDLF 326
           P SSSFL D L+C EE+  +   D                           L L +QDLF
Sbjct: 15  PNSSSFLLDALYCEEERWEEEEEDECLQEEACEKYGNVDNDGIDPSSTLLPLLLLEQDLF 74

Query: 327 WEDEELVSLFTKEQEQQKLSTST---DPYVFLARKEAVDWILKVKAHYGFTPLTAILAIN 497
           WEDEEL+SLF+KE++Q  L       D  + +AR++AV+W++KV AHYGF+ +TAILAIN
Sbjct: 75  WEDEELLSLFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAIN 134

Query: 498 YLDRFLSSLHFQ 533
           YLDRFLSSLHFQ
Sbjct: 135 YLDRFLSSLHFQ 146



 Score = 85.9 bits (211), Expect(2) = 1e-40
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = +1

Query: 613 PWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQKMELL 759
           PWMIQL AV+CLSLAAKVEET+VPLLLDLQVED+K++FEAK IQ+MELL
Sbjct: 150 PWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELL 198


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