BLASTX nr result

ID: Atractylodes22_contig00030531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030531
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   106   2e-21
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   101   6e-20
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                100   1e-19
dbj|BAG72152.1| hypothetical protein [Lotus japonicus]                100   1e-19
dbj|BAG72151.1| hypothetical protein [Lotus japonicus]                100   1e-19

>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/105 (52%), Positives = 72/105 (68%)
 Frame = -1

Query: 315  SSAYHPQTDGQTEVVNRCVETYLQCFINGRPKQRANCHGLSIGTTPRSSYHTATKSTPFK 136
            S+AYHPQTDGQTEVVNRC+E+YL+CF   RP         +      +SYH+ATK+TPF+
Sbjct: 1358 STAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWA-EYWYNTSYHSATKTTPFQ 1416

Query: 135  LLYGREPPRLLPFPTLESTNSTVD*MLVDRDKLLTELRNQLEKAQ 1
             +YGREPP LL +  + + N+ V+ +L DRD +L ELR  LE AQ
Sbjct: 1417 AVYGREPPVLLRYGDIPTNNANVEELLKDRDGMLVELRENLEIAQ 1461


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
 Frame = -1

Query: 315  SSAYHPQTDGQTEVVNRCVETYLQCFINGRPKQRAN---CHGLSIGTTPRSSYHTATKST 145
            SSAYHPQTDGQTE+VNR +ETYL+CF+ G P+  A        S  T+P    HT+TK +
Sbjct: 1332 SSAYHPQTDGQTEIVNRALETYLRCFVGGHPRSWAKWLPWAEFSYNTSP----HTSTKMS 1387

Query: 144  PFKLLYGREPPRLLPFPTLESTNSTVD*MLVDRDKLLTELRNQLEKAQ 1
            PFK+LYGR+PP ++  P  +++  +++ ML DRD ++ +L+  L +AQ
Sbjct: 1388 PFKVLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQ 1435


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/106 (50%), Positives = 70/106 (66%)
 Frame = -1

Query: 318  FSSAYHPQTDGQTEVVNRCVETYLQCFINGRPKQRANCHGLSIGTTPRSSYHTATKSTPF 139
            FSSAYHPQTDGQTEVVNRCVETYL+C    +PKQ       +      ++YH+A K+TPF
Sbjct: 1262 FSSAYHPQTDGQTEVVNRCVETYLRCVTGSKPKQWPKWLSWA-EFWYNTNYHSAIKTTPF 1320

Query: 138  KLLYGREPPRLLPFPTLESTNSTVD*MLVDRDKLLTELRNQLEKAQ 1
            K LYGREPP +       ++   V+ +  +R+ +L EL++ LEKAQ
Sbjct: 1321 KALYGREPPVIFKGNDSLTSVDEVEKLTAERNLILEELKSNLEKAQ 1366


>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
          Length = 1369

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/106 (50%), Positives = 70/106 (66%)
 Frame = -1

Query: 318  FSSAYHPQTDGQTEVVNRCVETYLQCFINGRPKQRANCHGLSIGTTPRSSYHTATKSTPF 139
            FSSAYHPQTDGQTEVVNRCVETYL+C    +PKQ       +      ++YH+A K+TPF
Sbjct: 1073 FSSAYHPQTDGQTEVVNRCVETYLRCVTGSKPKQWPKWLSWA-EFWYNTNYHSAIKTTPF 1131

Query: 138  KLLYGREPPRLLPFPTLESTNSTVD*MLVDRDKLLTELRNQLEKAQ 1
            K LYGREPP +       ++   V+ +  +R+ +L EL++ LEKAQ
Sbjct: 1132 KALYGREPPVIFKGNDSLTSVDEVEKLTAERNLILEELKSNLEKAQ 1177


>dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/106 (50%), Positives = 70/106 (66%)
 Frame = -1

Query: 318  FSSAYHPQTDGQTEVVNRCVETYLQCFINGRPKQRANCHGLSIGTTPRSSYHTATKSTPF 139
            FSSAYHPQTDGQTEVVNRCVETYL+C    +PKQ       +      ++YH+A K+TPF
Sbjct: 1262 FSSAYHPQTDGQTEVVNRCVETYLRCVTGSKPKQWPKWLSWA-EFWYNTNYHSAIKTTPF 1320

Query: 138  KLLYGREPPRLLPFPTLESTNSTVD*MLVDRDKLLTELRNQLEKAQ 1
            K LYGREPP +       ++   V+ +  +R+ +L EL++ LEKAQ
Sbjct: 1321 KALYGREPPVIFKGNDSLTSVDEVEKLTAERNLILEELKSNLEKAQ 1366


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