BLASTX nr result

ID: Atractylodes22_contig00030510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030510
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258...    73   2e-11
emb|CBI16338.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    69   3e-10
ref|XP_004160912.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    56   3e-06
ref|XP_002330022.1| chromatin remodeling complex subunit [Populu...    55   6e-06

>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
          Length = 1534

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 36/162 (22%)
 Frame = +3

Query: 3    RQRKRPQYFEVSPKKTNAGNDDVGRKRKKTANIIIEPVASEPGIEEGE-IAGTCTGASGI 179
            R RKR QYF+ S K++   +D+V +KR+K              +++G+ + G   GASGI
Sbjct: 580  RNRKRVQYFDESSKRSEHESDEVVKKRRK--------------VDKGKLVTGDKEGASGI 625

Query: 180  PSHNESQS-SPGDSFWCDAIRN----------------------------------ETSF 254
             ++NESQS S   +   DA+                                    + S 
Sbjct: 626  SANNESQSLSRPTACTHDALHANRASTSPPLVSDISEASSEIHTIEFEGRRKLRDAQKSL 685

Query: 255  CCLLKLNISKLCEVLSLSEDVKIMVERFLEYVIENYRVNKEP 380
              +L+ +ISKLC++L LSEDVK MV R LEYV+ N+ VN+EP
Sbjct: 686  HLVLETDISKLCDILQLSEDVKGMVGRLLEYVMNNHHVNREP 727


>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
 Frame = +3

Query: 3    RQRKRPQYFEVSPKKTNAGNDDVGRKRKKTANIIIEPVASEPGIEEGEIAGTCTGASGIP 182
            R RKR QYF+ S K++   +D+V +KR+K     ++      G +EG+    CT    + 
Sbjct: 1260 RNRKRVQYFDESSKRSEHESDEVVKKRRK-----VDKGKLVTGDKEGKWPTACTH-DALH 1313

Query: 183  SHNESQSSPGDSFWCDAIRN---------------ETSFCCLLKLNISKLCEVLSLSEDV 317
            ++  S S P  S   +A                  + S   +L+ +ISKLC++L LSEDV
Sbjct: 1314 ANRASTSPPLVSDISEASSEIHTIEFEGRRKLRDAQKSLHLVLETDISKLCDILQLSEDV 1373

Query: 318  KIMVERFLEYVIENYRVNKEP 380
            K MV R LEYV+ N+ VN+EP
Sbjct: 1374 KGMVGRLLEYVMNNHHVNREP 1394


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 24/150 (16%)
 Frame = +3

Query: 3    RQRKRPQYFEVSPKKTNAGNDDVGRKRKKTAN---------IIIEPVASEPGIEEGEIAG 155
            R RKR QY +   K T    D+V +KR K AN           +   +  P +   +   
Sbjct: 1163 RNRKRVQYADDIQKNTVVEGDEVVKKRNKVANNSTNSPSLKAALIGTSGAPVLNMSQFLP 1222

Query: 156  TCTG------ASGIPSHNESQSSPGDSFWCDAIR---------NETSFCCLLKLNISKLC 290
            + TG       + + +   S S+  +    + +          +E S   +LK  I+KLC
Sbjct: 1223 SSTGRLNTTATNHVSNFRHSNSNSSEVLKANKVEYNERMNLHDSEKSLHLILKPEITKLC 1282

Query: 291  EVLSLSEDVKIMVERFLEYVIENYRVNKEP 380
            E+L L E+VK+MVERFLEYV+ N+ +++EP
Sbjct: 1283 EILQLPENVKVMVERFLEYVLNNHHISREP 1312


>ref|XP_004160912.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222705
           [Cucumis sativus]
          Length = 1675

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 50/155 (32%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
 Frame = +3

Query: 3   RQRKRPQYFEVSPKKTNAGNDDVGRKRKKTANIIIEPVASEPGIEEGEIAGT-------- 158
           R RKR Q  + S  K+    ++  RKRKK +N  ++ VA E      E  GT        
Sbjct: 420 RNRKRVQQTDDSLNKSEYEIEESVRKRKKVSNNNVK-VAQEENFTHKEKEGTSKAPKHTC 478

Query: 159 --------CTGASGIPSHNESQSSPGD---------SFWCDAIRNET----SFCCLLKLN 275
                   C   S I +H  + S   +         S   D IR  T    S  CLLK  
Sbjct: 479 QNSTSLAACEDDSYIENHLSTSSLIANDILKILKYKSVGFDEIRKLTDLRKSLHCLLKPE 538

Query: 276 ISKLCEVLSLSEDVKIMVERFLEYVIENYRVNKEP 380
           IS+LC++L L E VK   E+F EYV++++ +  EP
Sbjct: 539 ISQLCKILKLPEHVKDEAEKFFEYVMDSHHILTEP 573


>ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222871447|gb|EEF08578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1441

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = +3

Query: 240 NETSFCCLLKLNISKLCEVLSLSEDVKIMVERFLEYVIENYRVNKEP 380
           +E S    LK  I+KLCE+L L E+VK+MVE+F EYV+ N+ V++EP
Sbjct: 334 SEKSLHLFLKPEIAKLCEILQLPENVKVMVEQFREYVLNNHHVSREP 380


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