BLASTX nr result

ID: Atractylodes22_contig00030483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030483
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17868.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002529525.1| hypothetical protein RCOM_1716580 [Ricinus c...    88   7e-16
ref|XP_002893671.1| single-stranded DNA binding protein [Arabido...    87   2e-15
ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana] gi|75334520...    86   3e-15
gb|AAM63642.1| unknown [Arabidopsis thaliana]                          86   3e-15

>emb|CBI17868.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +3

Query: 336 WPRPSEIPWQAKVVNSVNLIGRVKIPVQFEASSDGKNWAGTIISLD-DASESSPSLPSFW 512
           WPRPSEIPWQAKV NSVNLIG+V  PVQF+ SSDGK WA T+I+ D DA+  SP+L   W
Sbjct: 92  WPRPSEIPWQAKVCNSVNLIGKVHAPVQFQQSSDGKCWAVTVIAQDADAASHSPAL---W 148

Query: 513 IPVIFEG 533
           IP+ FEG
Sbjct: 149 IPLTFEG 155


>ref|XP_002529525.1| hypothetical protein RCOM_1716580 [Ricinus communis]
           gi|223531009|gb|EEF32863.1| hypothetical protein
           RCOM_1716580 [Ricinus communis]
          Length = 218

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 45/75 (60%), Positives = 50/75 (66%)
 Frame = +3

Query: 309 VAVRKEPVTWPRPSEIPWQAKVVNSVNLIGRVKIPVQFEASSDGKNWAGTIISLDDASES 488
           VAV KE   WPRP EIP+QAK  NSVNL G V  P+QF+AS D + WA T+IS    S  
Sbjct: 44  VAVSKESCDWPRPKEIPFQAKASNSVNLTGYVSEPIQFQASPDHRFWAATVISQHHPSSD 103

Query: 489 SPSLPSFWIPVIFEG 533
           S   P FWIPVIFEG
Sbjct: 104 S---PHFWIPVIFEG 115


>ref|XP_002893671.1| single-stranded DNA binding protein [Arabidopsis lyrata subsp.
           lyrata] gi|297339513|gb|EFH69930.1| single-stranded DNA
           binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
 Frame = +3

Query: 321 KEPVTWPRPSEIPWQAKVVNSVNLIGRVKIPVQFEASSDGKNWAGTIISLDDASES---S 491
           K    WPRP+E+P+Q K+ NS++LIG V  PVQF+++ DGK WAGT+IS + +S+S   S
Sbjct: 51  KSTEEWPRPTEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSVS 110

Query: 492 PSLPSFWIPVIFEG 533
            S  +FWIPV+FEG
Sbjct: 111 DSSSNFWIPVLFEG 124


>ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana]
           gi|75334520|sp|Q9FYJ2.1|OSB4_ARATH RecName: Full=Protein
           OSB4, chloroplastic; AltName: Full=Organellar
           single-stranded DNA-binding protein 4; Flags: Precursor
           gi|9755375|gb|AAF98182.1|AC000107_5 F17F8.7 [Arabidopsis
           thaliana] gi|332193185|gb|AEE31306.1| protein OSB4
           [Arabidopsis thaliana]
          Length = 360

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
 Frame = +3

Query: 321 KEPVTWPRPSEIPWQAKVVNSVNLIGRVKIPVQFEASSDGKNWAGTIISLDDASES---S 491
           K    WPRP E+P+Q K+ NS++LIG V  PVQF+++ DGK WAGT+IS + +S+S   S
Sbjct: 54  KSSEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSES 113

Query: 492 PSLPSFWIPVIFEG 533
            S  +FWIPV+FEG
Sbjct: 114 DSSSNFWIPVLFEG 127


>gb|AAM63642.1| unknown [Arabidopsis thaliana]
          Length = 360

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
 Frame = +3

Query: 321 KEPVTWPRPSEIPWQAKVVNSVNLIGRVKIPVQFEASSDGKNWAGTIISLDDASES---S 491
           K    WPRP E+P+Q K+ NS++LIG V  PVQF+++ DGK WAGT+IS + +S+S   S
Sbjct: 54  KSSEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSES 113

Query: 492 PSLPSFWIPVIFEG 533
            S  +FWIPV+FEG
Sbjct: 114 DSSSNFWIPVLFEG 127


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