BLASTX nr result

ID: Atractylodes22_contig00030482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030482
         (1814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20286.3| unnamed protein product [Vitis vinifera]              248   5e-63
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...   239   1e-60
ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...   229   2e-57
ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus ...   207   6e-51
ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|3555...   171   8e-40

>emb|CBI20286.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  248 bits (632), Expect = 5e-63
 Identities = 157/375 (41%), Positives = 221/375 (58%), Gaps = 28/375 (7%)
 Frame = +1

Query: 307  DHGGFNSNDFISRMPDDILVSILSRLPLKEAATTSNLSTRWRYLWCQTDGLDFDANEKLD 486
            D G F   D +S +PD+IL+SILSRL L+EAA TS LS RWRYLW  T  L+FD+   ++
Sbjct: 15   DDGDFGE-DLLSELPDEILISILSRLTLREAAATSVLSQRWRYLWTYTSRLNFDS--VVN 71

Query: 487  KIAVDSKS--------RVVERPKYINWVNRVTRQHKGP-TIDEFRICFDLDKSSKGAIDK 639
            KI   S S        R   R KYI WV++V  +++G   +DEFR+CFDL K S+  IDK
Sbjct: 72   KIVRRSHSFALSTAAGRRRRRRKYIKWVHKVLAKYRGGRNLDEFRVCFDLSKRSRSDIDK 131

Query: 640  WVEFAISKRVQKLELDLLENGE----------MLRQPPRNYVFPIKIFDRSLGLNVPKMF 789
            W EFA+SK V+ LE D L              ML      Y FP +I    LG+   +  
Sbjct: 132  WFEFAMSKNVKNLEFDFLRCSSQNQDRDPWFVMLSYFQNFYKFPHRI----LGVREARDP 187

Query: 790  SGKKMDMKFLKSLFLKCVNVSEEALGKLLTNCPALQQLSIHGSGDLVNVKISGQSLVLKY 969
            +G  +  K LK+L LK +NVS EA+   L+NCP L++LS+HGS  LVN++++G S++L++
Sbjct: 188  NGMFVGFKSLKTLSLKSINVSSEAVEYFLSNCPLLERLSVHGSESLVNLRVAGPSIMLRH 247

Query: 970  FEIVFCFGVKSIEIRDSNLESFSYLGP------GITIKLSNLPMLEEISIGEGYSGFENN 1131
             EIV C  +++IEI D+NL SF+Y G          + + N P+L E+  G G  GF  N
Sbjct: 248  LEIVKCSSIQTIEICDTNLVSFTYRGERKGDLLPNNMHIENSPLLVEVLAGVGRLGFAKN 307

Query: 1132 VFGQISCCISHLQI--LTLDIYRPEENIKFLSFPELPKLKQLILKV-GAWDDDSLLEFTS 1302
            +  ++S C+  LQI  LT+D + PE +  +L  P+L  LKQL L V     ++ LL F +
Sbjct: 308  MLLKLSSCVHQLQILQLTVDHFFPERSRAYL-LPKLRNLKQLKLTVFVGCPENCLLGFVA 366

Query: 1303 LAKACPKLQRFVIQL 1347
            + K CP L+  V+Q+
Sbjct: 367  MLKKCPHLESLVLQV 381


>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 464

 Score =  239 bits (611), Expect = 1e-60
 Identities = 171/455 (37%), Positives = 246/455 (54%), Gaps = 13/455 (2%)
 Frame = +1

Query: 322  NSNDFISRMPDDILVSILSRLPLKEAATTSNLSTRWRYLWCQTDGL-DFDANEKLD--KI 492
            N ++ IS++P+D+L++ILSRL +KEAA TS LSTRWR+LW    G+ DFDA+  +   ++
Sbjct: 30   NISEHISQLPEDVLLNILSRLTMKEAARTSILSTRWRHLWTYYTGIMDFDASLTMWYLQL 89

Query: 493  AVDSKSRVVERPKYINWVNRVTRQHKGPTIDEFRICFDLDKSSKGAIDKWVEFAISKRVQ 672
             + SKS  +ER  +++WVN+V R H+GPT++  RICFDLD      ID W+  A+ KRV+
Sbjct: 90   GLGSKSLDMERHSFVSWVNQVLRSHEGPTMEGLRICFDLDSDFMYEIDSWITIAMQKRVK 149

Query: 673  KLELDLLENGEMLRQPPRNYVFPIKIFDRSLGLNVPKMFSGKKMDMKF--LKSLFLKCVN 846
            +LE+D L N E   +   +Y FP                SG   D  F  LK+L L  V+
Sbjct: 150  RLEID-LTNIEPSIKTTGSYAFP----------------SGLLNDSSFSSLKTLQLNMVD 192

Query: 847  VSEEALGKLLTN-CPALQQLSIHGSGDLVNVKISGQSLVLKYFEIVFCFGVKSIEIRDSN 1023
            V+ EAL  LL + CP L+ LSI  S  LV++K+SG SL LKY E+V C  +K +EI  ++
Sbjct: 193  VTGEALQHLLLSWCPLLEVLSIVNSTSLVSLKVSGSSLKLKYLEMVCCNNLKYLEITAAS 252

Query: 1024 LESFSYLGPGITIKLSNLPMLEEISIGEGYSGFENNVFGQISCCISHLQILTLDIYRPEE 1203
            L SF Y GP I +   ++P L + S G  +         Q S  I  L+ L  D+     
Sbjct: 253  LVSFKYYGPLIGLPFKSVPNLVDASFGGPFCQLTIENLYQFSLYILQLETLRFDVGSAYL 312

Query: 1204 NIKF-LSFPELPKLKQL-ILKVGAWDDDSLLEFTSLAKACPKLQRFVIQLI-WMSXXXXX 1374
              +F  +FP L  +K L +    +     L    SL K CP L RF +++I   S     
Sbjct: 313  MREFPTNFPILSNVKHLEVTTAVSAVAHCLFPCLSLLKGCPLLHRFTLKVISCESTLVCR 372

Query: 1375 XXXXXXXXXXXQHLEVVEIVGYYGRTSDVELAVYFIDNAVALQKIMIDPRYQVLERTPIG 1554
                         L+VVE++G+ G  ++VEL +YF+ NA  L+ ++I P      R+P  
Sbjct: 373  ASQKVPEDHSHPCLKVVEVLGFQGNAAEVELVLYFLRNAAVLKNLIISPCAPCYLRSP-- 430

Query: 1555 NDQLK-KEKAARSCAKK---QLEPRTPRGVELVIL 1647
              QLK KE      AK+   +L  R P GV+ V+L
Sbjct: 431  -SQLKFKETELYQSAKQHAVELGARVPPGVDFVVL 464


>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
            [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
            PREDICTED: putative FBD-associated F-box protein
            At5g56700-like [Cucumis sativus]
          Length = 475

 Score =  229 bits (583), Expect = 2e-57
 Identities = 165/443 (37%), Positives = 241/443 (54%), Gaps = 2/443 (0%)
 Frame = +1

Query: 325  SNDFISRMPDDILVSILSRLPLKEAATTSNLSTRWRYLWCQTDGLDFDANEKLDKIAVDS 504
            S D IS +P DILV ILS LPLKEAA TS LS +WR LW     L+FDA++KL  +    
Sbjct: 43   SVDSISHLPQDILVFILSLLPLKEAARTSTLSHKWRCLWSFIPCLNFDAHKKLLDLQFTD 102

Query: 505  KSRVVERPKYINWVNRVTRQHKGPTIDEFRICFDLDKSSKGAIDKWVEFAISKRVQKLEL 684
            ++   ER +++ WVNRV   +KG  ++  RI F+LD S +  +D+WV+FA+  +++  EL
Sbjct: 103  ENLKSERRQFVKWVNRVIDSYKGSNLETLRIRFNLDSSFQCDVDRWVQFAMQWKLKMFEL 162

Query: 685  DLLENGEMLRQPPRNYVFPIKIFDRSLGLNVPK-MFSGKKMDMKFLKSLFLKCVNVSEEA 861
            +L ++ +     P +  FP ++ D     N P+ MFS        LK+L L  VNV  EA
Sbjct: 163  NLSDSYDSGIYSPCS--FP-QLSDGPKE-NFPRFMFSNSSS----LKTLKLIAVNVGGEA 214

Query: 862  LGKLLTNCPALQQLSIHGSGDLVNVKISGQSLVLKYFEIVFCFGVKSIEIRDSNLESFSY 1041
            L   LTN P L+ L +  S  L+++++ G SL L+  E+  C  ++S+E+   NLESF Y
Sbjct: 215  LECFLTNSPLLEILVVEYSHCLLSLRVVGASLKLRQLEVCMCNYLESLEVSAPNLESFKY 274

Query: 1042 LGPGITIKLSNLPMLEEISIGEGYSGFENNVFGQISCCISHLQILTLDIYRP-EENIKFL 1218
            +GP +++ L N P L E   G  +     + F  +S   S LQ L LD+     EN  F 
Sbjct: 275  VGPWLSMPLKNTPKLLETYFGSEFGVEIIDHFFLLSSYSSQLQKLILDLEVDFMENQGFR 334

Query: 1219 SFPELPKLKQLILKVGAWDDDSLLEFTSLAKACPKLQRFVIQLIWMSXXXXXXXXXXXXX 1398
             +P L  LK+L L V A    SL+ FTSL KA P L +F ++L ++              
Sbjct: 335  KWPILANLKELKLIVIAEGHSSLIGFTSLIKASPSLLKFTLKLDYLD-MFEQRPLRKVKK 393

Query: 1399 XXXQHLEVVEIVGYYGRTSDVELAVYFIDNAVALQKIMIDPRYQVLERTPIGNDQLKKEK 1578
               Q+++VVE+ G+ G+  D+EL  YF  NAVAL++I+ D R      T     Q  +  
Sbjct: 394  FPHQYIKVVELAGFVGKPIDLELVQYFHKNAVALEEIIFDTRKPKDMGTIFEKKQNAETI 453

Query: 1579 AARSCAKKQLEPRTPRGVELVIL 1647
            A R CA   L  +   GV++ I+
Sbjct: 454  AGRECA-NGLRSKLFSGVKVTII 475


>ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223550470|gb|EEF51957.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 457

 Score =  207 bits (528), Expect = 6e-51
 Identities = 152/454 (33%), Positives = 233/454 (51%), Gaps = 15/454 (3%)
 Frame = +1

Query: 331  DFISRMPDDILVSILSRLPLKEAATTSNLSTRWRYLWCQTDGLDFDANE-KLDKIAVDSK 507
            D IS +P++IL SILS L  +EA+ TS LS RWR LW  T  L+FD  +  L K   D  
Sbjct: 19   DRISHLPEEILTSILSFLTTEEASRTSVLSRRWRILWTLTSSLNFDCTKIALGKKLDDRF 78

Query: 508  SRVVERPKYINWVNRVTRQHKGPTIDEFRICFDLDKSSKGAIDKWVEFAISKRVQKLELD 687
            +   ER ++  WV RV   +K   +DEF + FDL  +S+ ++DKW+ FA+SK +++LE+ 
Sbjct: 79   ALRSERTRFAMWVKRVLEVYKDSNLDEFIVSFDLTCNSRRSLDKWMNFAMSKTLKRLEIS 138

Query: 688  LLE-NGEMLRQPPRNYVFPIKIFDRSLGLNVPKMFSGKKMDMKFLKSLFLKCVNVSEEAL 864
            L   +    R     Y FP+  +    G   P+  S    ++  L+SL L+ VN++ E +
Sbjct: 139  LAPFSSRKFRFHDECYSFPVDCYSFIRG---PEGLS----NISSLRSLCLRYVNMTGEVV 191

Query: 865  GKLLTNCPALQQLSIHGSGDLVNVKISGQSLVLKYFEIVFCFGVKSIEIRDSNL------ 1026
               L NCP L+QL++  +  L ++K+   SL LKY EI  C+ +K+ EI   NL      
Sbjct: 192  EHFLLNCPLLEQLTVAVAYRLESLKVPASSLRLKYLEIFDCYHLKNFEICAPNLVTILYN 251

Query: 1027 ESFSYLGPGITIKLSNLPMLEEISIGEGYSGFENNVFGQISCCISHLQILTLDIYRPE-- 1200
            +   Y G  + ++  +LP L ++ +G        + FG  +C  S  Q++TL I   E  
Sbjct: 252  QGGRYNGRRMKLQAVHLPHLLDLHLGGPELSITEDFFG--ACSSSFSQLMTLKIVVTEVR 309

Query: 1201 -----ENIKFLSFPELPKLKQLILKVGAWDDDSLLEFTSLAKACPKLQRFVIQLIWMSXX 1365
                   +KF  FPEL  L+ L  K   +D  S+L    L K+ P L +F ++L   S  
Sbjct: 310  MQECQVRLKFPKFPELTNLRHLGFKT-EYDICSILAVRLLIKSSPLLNKFTLELADGSRC 368

Query: 1366 XXXXXXXXXXXXXXQHLEVVEIVGYYGRTSDVELAVYFIDNAVALQKIMIDPRYQVLERT 1545
                          Q+L+VVEIVG+ G   + E  ++F+DNA AL+KI++ PR      +
Sbjct: 369  QIKRRVRTGINCPHQNLKVVEIVGFIGGAVEYEFIMFFLDNASALEKIILRPR-DPFSPS 427

Query: 1546 PIGNDQLKKEKAARSCAKKQLEPRTPRGVELVIL 1647
               N  L++ +      K +  PR    VE+VI+
Sbjct: 428  EAENKMLRRAREHAEKFKTRFSPR----VEVVIM 457


>ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|355509906|gb|AES91048.1|
            F-box family-6 [Medicago truncatula]
          Length = 447

 Score =  171 bits (432), Expect = 8e-40
 Identities = 145/479 (30%), Positives = 225/479 (46%), Gaps = 22/479 (4%)
 Frame = +1

Query: 277  KRARLAQSKGDHGGFNSNDFISRMPDDILVSILSRLPLKEAATTSNLSTRWRYLWCQTDG 456
            K  +  ++K ++      D I+++PD I ++IL+ LP+KEAA TS LS +W+ LW    G
Sbjct: 7    KDGKQKRAKSNNEKDYEEDIINQLPDGIPINILANLPIKEAARTSILSRKWKNLWTYFSG 66

Query: 457  -LDFDANEKLDKIAVDSKSRV-------------VERPKYINWVNRVTRQHKGPTIDEFR 594
             L+F+ +  +  +  D K                 ER  Y +W+N +    +  T+   +
Sbjct: 67   TLEFEGSPIMKDMIKDLKKVTGGRLQMAMEIMYDAERQTYTSWINELLSSLQCSTLQGLK 126

Query: 595  ICFDLDKSSKGAIDKWVEFAISKRVQKLELDLLENGEMLRQPPRNYVFPIKIFDRSLGLN 774
              F +   S   ID W+ FA+ K+VQKLEL     G  +      YV P+ IF       
Sbjct: 127  FWFPMKNVSD--IDNWIHFAVQKKVQKLELYF---GHTIV-----YVLPLHIF------- 169

Query: 775  VPKMFSGKKMDMKFLKSLFLKCVNVSEEALGKLLTNCPALQQLSIHGSGDLVNVKISGQS 954
                   K      L  L +K + V++E L  L+ NC  L+ LS+  S     +K+SG S
Sbjct: 170  -------KVERFNSLCVLRMKSITVTDEMLEYLMCNCQLLETLSLVDSRVPKTMKVSGSS 222

Query: 955  LVLKYFEIVFCFGVKSIEIRDSNLESFSYLGPGITIKLSNLPMLEEISIGEGYSGFENNV 1134
            L LK  E+V C+ +  IEI    L SF Y G  +  +  ++P LEE S G  +  F    
Sbjct: 223  LKLKCLELVRCWELTKIEIFAEKLVSFKYYGSHLETEFKSVPCLEEASFGGSFVEFVRES 282

Query: 1135 FGQISCCISHLQILTLDI-YRPEENIKFLSFPELPKLKQL-ILKVGAWDDDSLLEFTSLA 1308
            F      +  +++L LDI     E I +LS  +LPKLK L  L++ A  DD +     L 
Sbjct: 283  F------LPQIKVLKLDITQNSPEVIYWLS--QLPKLKNLKHLELVACADDGISACVMLL 334

Query: 1309 KACPKLQRFVIQLIWMSXXXXXXXXXXXXXXXXQHLEVVEIVGYYGRTSDVELAVYFIDN 1488
            KA P L R  I++  ++                 +L+ +E+VG+ G   +VEL +Y ++N
Sbjct: 335  KASPSLWRLKIKM--LNTKPTYITEHKFTMECHYNLKELELVGFCGAACEVELVMYILEN 392

Query: 1489 AVALQKIMID------PRYQVLERTPIGNDQLKKEKAARSCAKKQLEPRTPRGVELVIL 1647
               LQKI ID      P+ + L+        L+++K    CA + L+ + P  +E V L
Sbjct: 393  TDELQKITIDTRLPTKPKLRPLDEEHFETWDLEEKK---RCAWR-LKDKIPPCIEFVCL 447


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