BLASTX nr result

ID: Atractylodes22_contig00030446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030446
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    62   4e-08
ref|XP_002302072.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    62   6e-08
ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    61   8e-08
ref|XP_002879269.1| zinc finger family protein [Arabidopsis lyra...    60   1e-07

>ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 445

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/70 (45%), Positives = 45/70 (64%)
 Frame = -3

Query: 410 IQKFVMSKLKLGSEHEVELRCMGQPLVPTLPLGNLLELWLXXXXXXXXXXXXXXXPAPKE 231
           IQK++M KL L SE EVE++CMGQP++PTL L NL+ELWL                A K+
Sbjct: 373 IQKYLMKKLDLTSETEVEIKCMGQPVLPTLQLYNLVELWLDMASTPQRIPATIGSSA-KD 431

Query: 230 YMLEISYARK 201
           +++ ++Y RK
Sbjct: 432 FVMVLAYGRK 441


>ref|XP_002302072.1| predicted protein [Populus trichocarpa] gi|222843798|gb|EEE81345.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/70 (45%), Positives = 45/70 (64%)
 Frame = -3

Query: 410 IQKFVMSKLKLGSEHEVELRCMGQPLVPTLPLGNLLELWLXXXXXXXXXXXXXXXPAPKE 231
           IQK++M KL L SE EVE+RCMG+P++PTL L NL++ WL                A K+
Sbjct: 364 IQKYLMKKLDLASEAEVEIRCMGRPVIPTLLLYNLVDQWLQTVPKTEQVPVTAGFSA-KD 422

Query: 230 YMLEISYARK 201
           Y++ ++YARK
Sbjct: 423 YVMVLAYARK 432


>ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 428

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/74 (43%), Positives = 47/74 (63%)
 Frame = -3

Query: 410 IQKFVMSKLKLGSEHEVELRCMGQPLVPTLPLGNLLELWLXXXXXXXXXXXXXXXPAPKE 231
           IQK++M KL L SE EVE++C+GQP++PTL L NL+ELWL                A K+
Sbjct: 356 IQKYLMKKLDLTSETEVEIKCVGQPVLPTLQLYNLVELWLDTAPTSQRIPATIGSSA-KD 414

Query: 230 YMLEISYARKGSAP 189
           +++ ++YAR+   P
Sbjct: 415 FVMVLAYARRVPDP 428


>ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
           gi|297735508|emb|CBI17948.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/70 (44%), Positives = 46/70 (65%)
 Frame = -3

Query: 410 IQKFVMSKLKLGSEHEVELRCMGQPLVPTLPLGNLLELWLXXXXXXXXXXXXXXXPAPKE 231
           IQK++M KL L SE EVE++CMGQP++PTL L NL++LWL                + KE
Sbjct: 358 IQKYLMRKLDLTSETEVEIKCMGQPVLPTLQLHNLVDLWL-QTASTSQRVPASIGSSGKE 416

Query: 230 YMLEISYARK 201
           +++ ++YAR+
Sbjct: 417 FVMVLAYARR 426


>ref|XP_002879269.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325108|gb|EFH55528.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 420

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -3

Query: 410 IQKFVMSKLKLGSEHEVELRCMGQPLVPTLPLGNLLELWLXXXXXXXXXXXXXXXPAPKE 231
           IQK++M KL L SE EVE++CMG+P++PTL L +L+ELWL                A KE
Sbjct: 346 IQKYLMRKLDLKSEAEVEIKCMGEPVIPTLQLHSLVELWLETTSKHQRVAASIGSSA-KE 404

Query: 230 YMLEISYARK 201
           +++ + Y+RK
Sbjct: 405 FVMVLVYSRK 414


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