BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030427
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   216   2e-54
ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [S...   203   1e-50
ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group] g...   200   1e-49
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab...   199   2e-49
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   198   3e-49

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  216 bits (550), Expect = 2e-54
 Identities = 115/161 (71%), Positives = 126/161 (78%), Gaps = 5/161 (3%)
 Frame = +3

Query: 39  DDPSHPLLVDHSPDKSPESPQRPLKIAKFS-----HQAEEGENKTMGQNPRTIQRYLVAV 203
           D P H L      ++  ESPQRP KIA+        Q +   +KTM QNPR +QRYLVAV
Sbjct: 16  DSPKHLL------NRRSESPQRPSKIARTDDLSDGEQQDSVASKTMTQNPR-VQRYLVAV 68

Query: 204 EYIGTRFSGAQQQAPNFRTVVGVLQTAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVE 383
           EYIGTRFSG+QQQ  N RTV G LQ AFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVE
Sbjct: 69  EYIGTRFSGSQQQL-NCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVE 127

Query: 384 RISKRKPGEVLPPHEPYVVKKAVNHFLQKCEGDIMITDVRC 506
           RISKRKPGEVLPPHEP VV++AVNHFLQK EGD+M+ DVRC
Sbjct: 128 RISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRC 168


>ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [Sorghum bicolor]
           gi|241942657|gb|EES15802.1| hypothetical protein
           SORBIDRAFT_08g005650 [Sorghum bicolor]
          Length = 387

 Score =  203 bits (517), Expect = 1e-50
 Identities = 109/156 (69%), Positives = 120/156 (76%)
 Frame = +3

Query: 39  DDPSHPLLVDHSPDKSPESPQRPLKIAKFSHQAEEGENKTMGQNPRTIQRYLVAVEYIGT 218
           DDP+    +  S +  P  P   +K    +   EE E     +NPR  QRYLVAVEYIGT
Sbjct: 21  DDPTPSAKLQRSSE--PSDPTPAVKPNGGAETGEESEVMAGARNPRA-QRYLVAVEYIGT 77

Query: 219 RFSGAQQQAPNFRTVVGVLQTAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKR 398
           RFSG+QQQ PN RTVVGVL+ AFH+FIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKR
Sbjct: 78  RFSGSQQQ-PNQRTVVGVLEEAFHRFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKR 136

Query: 399 KPGEVLPPHEPYVVKKAVNHFLQKCEGDIMITDVRC 506
           KPGEVL PHEP VVK+AVNHFL K EGDIM+TDVRC
Sbjct: 137 KPGEVLTPHEPGVVKRAVNHFLLKNEGDIMVTDVRC 172


>ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group]
           gi|108862288|gb|ABA96079.2| tRNA pseudouridine synthase
           family protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113648859|dbj|BAF29371.1|
           Os12g0194800 [Oryza sativa Japonica Group]
           gi|215678805|dbj|BAG95242.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222616774|gb|EEE52906.1| hypothetical protein
           OsJ_35509 [Oryza sativa Japonica Group]
          Length = 391

 Score =  200 bits (508), Expect = 1e-49
 Identities = 111/166 (66%), Positives = 123/166 (74%), Gaps = 11/166 (6%)
 Frame = +3

Query: 42  DPSHPLLVDHSPDKSPE--SPQRPLKIAKFSHQAEEGENKTMG---------QNPRTIQR 188
           DPSH    D SP    +  SP  P   A+    A +G  +  G         +NP+  QR
Sbjct: 17  DPSH---ADPSPAAKLQRSSPPDPSPPAEAQGDATDGGGEVAGVRSGEMAGARNPQA-QR 72

Query: 189 YLVAVEYIGTRFSGAQQQAPNFRTVVGVLQTAFHKFIGQPVSIFCSSRTDAGVHALSNVC 368
           YLVAVEY+GTRFSG+QQQ  N RTVVGVL+ AFHKFIGQPVSIFCSSRTD GVHALSNVC
Sbjct: 73  YLVAVEYVGTRFSGSQQQL-NQRTVVGVLEEAFHKFIGQPVSIFCSSRTDTGVHALSNVC 131

Query: 369 HVDVERISKRKPGEVLPPHEPYVVKKAVNHFLQKCEGDIMITDVRC 506
           HVDVERISKRKPGE+LPPHEP VVK+AVNHFLQK EGDIM+TDVRC
Sbjct: 132 HVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRC 177


>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
           lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
           ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  199 bits (506), Expect = 2e-49
 Identities = 109/166 (65%), Positives = 126/166 (75%), Gaps = 10/166 (6%)
 Frame = +3

Query: 39  DDPSHPLLVDHSPDKSPESPQRPLKIAK---FSHQAEEGENKTMGQ-------NPRTIQR 188
           D+  HPL        S ES +R  K+A+   FS + E  E + +         NPR +QR
Sbjct: 3   DNLKHPL----DSTVSEESLERLSKVARIEGFSDEEEAEEQQGLADSESMNPVNPR-VQR 57

Query: 189 YLVAVEYIGTRFSGAQQQAPNFRTVVGVLQTAFHKFIGQPVSIFCSSRTDAGVHALSNVC 368
           YLVA+EYIGTRFSG+QQQA + RTVVGVLQ AFHKFIGQPV IFCSSRTDAGVHALSNVC
Sbjct: 58  YLVAIEYIGTRFSGSQQQAKD-RTVVGVLQDAFHKFIGQPVKIFCSSRTDAGVHALSNVC 116

Query: 369 HVDVERISKRKPGEVLPPHEPYVVKKAVNHFLQKCEGDIMITDVRC 506
           HVDVERISKRKPGEVLPPHEP VV++AVNHFLQ+ +GD+M+ DVRC
Sbjct: 117 HVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRC 162


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  198 bits (504), Expect = 3e-49
 Identities = 105/140 (75%), Positives = 114/140 (81%), Gaps = 3/140 (2%)
 Frame = +3

Query: 93  SPQRPLKIAKFSHQ---AEEGENKTMGQNPRTIQRYLVAVEYIGTRFSGAQQQAPNFRTV 263
           S QRPLKI K + +    +E E +TM   P  IQRYLVAVEYIGTRF G+QQQ PN RTV
Sbjct: 16  SSQRPLKIGKTTDELFHGDEEEAETMNPKPG-IQRYLVAVEYIGTRFYGSQQQ-PNCRTV 73

Query: 264 VGVLQTAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPYVVK 443
           VG L+ AF KFIGQPVS+FCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEP VV 
Sbjct: 74  VGALEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVH 133

Query: 444 KAVNHFLQKCEGDIMITDVR 503
           KAVNHFLQK EGD+ + DVR
Sbjct: 134 KAVNHFLQKHEGDVTVVDVR 153