BLASTX nr result

ID: Atractylodes22_contig00030369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030369
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32449.3| unnamed protein product [Vitis vinifera]              239   2e-61
ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containi...   239   2e-61
ref|XP_002521838.1| pentatricopeptide repeat-containing protein,...   223   1e-56
ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containi...   222   2e-56
ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containi...   221   5e-56

>emb|CBI32449.3| unnamed protein product [Vitis vinifera]
          Length = 790

 Score =  239 bits (609), Expect = 2e-61
 Identities = 109/152 (71%), Positives = 134/152 (88%), Gaps = 1/152 (0%)
 Frame = -3

Query: 455  KLSKEQREALVGLLLGGLQIESDEKRKNHMLIFKFNENSGVHRVLKRHICNQYHEWLASS 276
            KLSKEQRE L+GLLLGGLQ+ESDE+RKNH++ F+FNENSG H VL+RHI  QYHEWL SS
Sbjct: 574  KLSKEQREILIGLLLGGLQMESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSS 633

Query: 275  SK-QDGNEDTTCQVTTISHSYFGFYADQFWPQGQPAIPKLIHRWLSPQVLAYWYMYGGYK 99
            SK  D N+D   + +TISHSYFGFYADQFWP+G+P IPKLIHRWLSP+VLAYWYMYGG++
Sbjct: 634  SKLSDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHR 693

Query: 98   TSSGDILLKLRGSEDGVDRIVKTLQKKSLACK 3
            TSSGDILLKL+GS +GV+++V+TL+ +S+ C+
Sbjct: 694  TSSGDILLKLKGSREGVEKVVRTLKAQSMDCR 725


>ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
            [Vitis vinifera]
          Length = 823

 Score =  239 bits (609), Expect = 2e-61
 Identities = 109/152 (71%), Positives = 134/152 (88%), Gaps = 1/152 (0%)
 Frame = -3

Query: 455  KLSKEQREALVGLLLGGLQIESDEKRKNHMLIFKFNENSGVHRVLKRHICNQYHEWLASS 276
            KLSKEQRE L+GLLLGGLQ+ESDE+RKNH++ F+FNENSG H VL+RHI  QYHEWL SS
Sbjct: 607  KLSKEQREILIGLLLGGLQMESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSS 666

Query: 275  SK-QDGNEDTTCQVTTISHSYFGFYADQFWPQGQPAIPKLIHRWLSPQVLAYWYMYGGYK 99
            SK  D N+D   + +TISHSYFGFYADQFWP+G+P IPKLIHRWLSP+VLAYWYMYGG++
Sbjct: 667  SKLSDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHR 726

Query: 98   TSSGDILLKLRGSEDGVDRIVKTLQKKSLACK 3
            TSSGDILLKL+GS +GV+++V+TL+ +S+ C+
Sbjct: 727  TSSGDILLKLKGSREGVEKVVRTLKAQSMDCR 758


>ref|XP_002521838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538876|gb|EEF40474.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  223 bits (569), Expect = 1e-56
 Identities = 101/152 (66%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
 Frame = -3

Query: 455  KLSKEQREALVGLLLGGLQIESDEKRKNHMLIFKFNENSGVHRVLKRHICNQYHEWLASS 276
            KLSK+QRE LVGLLLGGL++ESD+ RK HM+ F+FNENS  H +L+RH+ ++YHEWL  S
Sbjct: 618  KLSKDQREILVGLLLGGLRVESDDNRKKHMIRFEFNENSSTHAILRRHLYDKYHEWLHPS 677

Query: 275  SK-QDGNEDTTCQVTTISHSYFGFYADQFWPQGQPAIPKLIHRWLSPQVLAYWYMYGGYK 99
             K  DG++  + + +TISHSYF FYA+QFWP+GQP IPKLIHRWLSPQVLA+WYMY G++
Sbjct: 678  CKLSDGSDGASYRFSTISHSYFSFYAEQFWPKGQPMIPKLIHRWLSPQVLAFWYMYAGHR 737

Query: 98   TSSGDILLKLRGSEDGVDRIVKTLQKKSLACK 3
            TSSGDILLKL+GS +GV+++ KTL+ KSL CK
Sbjct: 738  TSSGDILLKLKGSREGVEKVFKTLKSKSLNCK 769


>ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like, partial [Cucumis sativus]
          Length = 747

 Score =  222 bits (566), Expect = 2e-56
 Identities = 105/152 (69%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
 Frame = -3

Query: 455 KLSKEQREALVGLLLGGLQIESDEKRKNHMLIFKFNENSGVHRVLKRHICNQYHEWLASS 276
           KLSKEQRE LVGLLLGGL+IESDE+RKNH + F+F+ N   H VL+RHI  QYH+WL S+
Sbjct: 529 KLSKEQREILVGLLLGGLEIESDEERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSA 588

Query: 275 SK-QDGNEDTTCQVTTISHSYFGFYADQFWPQGQPAIPKLIHRWLSPQVLAYWYMYGGYK 99
           SK  DG+ D   +  T+SHSYFGFYADQFWP+G+ AIP LIHRWLSP+VLAYWYMYGG +
Sbjct: 589 SKLTDGDVDIPYKFCTVSHSYFGFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCR 648

Query: 98  TSSGDILLKLRGSEDGVDRIVKTLQKKSLACK 3
           TSSGDILLKL+GS +GV++IVK+L++KS+ CK
Sbjct: 649 TSSGDILLKLKGSHEGVEKIVKSLREKSIHCK 680


>ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
            [Cucumis sativus]
          Length = 797

 Score =  221 bits (563), Expect = 5e-56
 Identities = 104/152 (68%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
 Frame = -3

Query: 455  KLSKEQREALVGLLLGGLQIESDEKRKNHMLIFKFNENSGVHRVLKRHICNQYHEWLASS 276
            KLSKEQRE LVGLLLGGL+IESD++RKNH + F+F+ N   H VL+RHI  QYH+WL S+
Sbjct: 579  KLSKEQREILVGLLLGGLEIESDDERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSA 638

Query: 275  SK-QDGNEDTTCQVTTISHSYFGFYADQFWPQGQPAIPKLIHRWLSPQVLAYWYMYGGYK 99
            SK  DG+ D   +  T+SHSYFGFYADQFWP+G+ AIP LIHRWLSP+VLAYWYMYGG +
Sbjct: 639  SKLTDGDVDIPYKFCTVSHSYFGFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCR 698

Query: 98   TSSGDILLKLRGSEDGVDRIVKTLQKKSLACK 3
            TSSGDILLKL+GS +GV++IVK+L++KS+ CK
Sbjct: 699  TSSGDILLKLKGSHEGVEKIVKSLREKSIHCK 730


Top