BLASTX nr result

ID: Atractylodes22_contig00030310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030310
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   125   3e-27
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...   124   8e-27
ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   106   2e-21
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   100   2e-19
ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi...    94   1e-17

>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  125 bits (315), Expect = 3e-27
 Identities = 73/146 (50%), Positives = 92/146 (63%), Gaps = 16/146 (10%)
 Frame = -1

Query: 391 PEKVDDVANCREMLCDK--------------DLQILKENINGTFGSSRALTLELNDADSV 254
           PEKV+ VA+ REML +               ++ + +   NG  G S A++L  NDADSV
Sbjct: 237 PEKVEAVASPREMLGENYMHASFNSRPTGYSEMDVERAKTNGAVGGSHAVSLGHNDADSV 296

Query: 253 TSSSGSCSINCYKPYEM--YCGSGPVEDIEGHDSDAESVCQLGYKEEIDQSPTNAALADE 80
           T S GSCSI    PY++  +  +GP E+ +   SDAES C+LGY+E     PT   LA E
Sbjct: 297 TCSVGSCSITSNNPYKLLHHFSTGPSENDDC--SDAESFCRLGYEEGNCLLPTKEELAAE 354

Query: 79  IHRLELHAYRCTMEALHASGPLSWEK 2
           IHRLELHAYRCT+EALHASGPLSWE+
Sbjct: 355 IHRLELHAYRCTIEALHASGPLSWEQ 380


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/139 (46%), Positives = 89/139 (64%), Gaps = 13/139 (9%)
 Frame = -1

Query: 379 DDVANCREMLCDK-------------DLQILKENINGTFGSSRALTLELNDADSVTSSSG 239
           DDVA  +EM+ +K             ++ + +   +G  G S A+ ++ ND +S+TSS G
Sbjct: 210 DDVAFPKEMVGEKNMHSSFYSQTGFTEIDVERRKQSGAVGCSSAIEVDSNDEESITSSVG 269

Query: 238 SCSINCYKPYEMYCGSGPVEDIEGHDSDAESVCQLGYKEEIDQSPTNAALADEIHRLELH 59
           SCS      Y+M+  +G +EDI+G+ SDAES C  GY+E  +  PTN  LA E+HRLELH
Sbjct: 270 SCSTTSNNYYKMHHRAGFIEDIDGNFSDAESFCHRGYEEGTNCFPTNEELAAEVHRLELH 329

Query: 58  AYRCTMEALHASGPLSWEK 2
           AYRCTMEAL+ASGP SWE+
Sbjct: 330 AYRCTMEALYASGPFSWEQ 348


>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/115 (52%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
 Frame = -1

Query: 340 DLQILKENINGTFGSSRALTLELNDADSVTSSSGSCSINCYKPYEMY--CGSGPVEDIEG 167
           D++  KE   GT G S     E N ADS+T S GSCSI      ++     +GP +D++ 
Sbjct: 257 DMERRKET--GTVGCSFGENRESNHADSITCSVGSCSITSRNSCKLQFPVSAGPFDDVDS 314

Query: 166 HDSDAESVCQLGYKEEIDQSPTNAALADEIHRLELHAYRCTMEALHASGPLSWEK 2
             SDAESVCQ   +E     PT   LA EIHRLELHAYRCT+EALHASGPLSWE+
Sbjct: 315 SFSDAESVCQRSDEEGDCSPPTQEELAAEIHRLELHAYRCTIEALHASGPLSWEQ 369


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  100 bits (248), Expect = 2e-19
 Identities = 57/97 (58%), Positives = 66/97 (68%), Gaps = 4/97 (4%)
 Frame = -1

Query: 280 LELNDADSVTSSSGSCSI---NCYKP-YEMYCGSGPVEDIEGHDSDAESVCQLGYKEEID 113
           LE N A SVT S GSCSI   N YK  + +Y  +GP +D++   SDAESVCQ   +E   
Sbjct: 268 LESNHAYSVTCSVGSCSITSRNSYKSQFPVY--AGPFDDVDSSFSDAESVCQRSDEEGNC 325

Query: 112 QSPTNAALADEIHRLELHAYRCTMEALHASGPLSWEK 2
             PT   LA EIHRLELHAY CT+EALHASGPLSWE+
Sbjct: 326 SPPTQEELAAEIHRLELHAYHCTIEALHASGPLSWEQ 362


>ref|XP_003609252.1| RNA binding protein [Medicago truncatula]
           gi|355510307|gb|AES91449.1| RNA binding protein
           [Medicago truncatula]
          Length = 468

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 57/124 (45%), Positives = 68/124 (54%)
 Frame = -1

Query: 373 VANCREMLCDKDLQILKENINGTFGSSRALTLELNDADSVTSSSGSCSINCYKPYEMYCG 194
           V N +  + D DL+  K+      G S     +LN ADSVT S GS              
Sbjct: 245 VNNRKTGIVDMDLERRKQT--AAVGCSFGQNFDLNFADSVTCSVGS-------------- 288

Query: 193 SGPVEDIEGHDSDAESVCQLGYKEEIDQSPTNAALADEIHRLELHAYRCTMEALHASGPL 14
             P ED++   SDAES C+ GY E     PT   LA +IHRLELHAYRCT+EAL ASGPL
Sbjct: 289 --PFEDVDSSYSDAESTCKRGYMEATCSRPTRKELAMKIHRLELHAYRCTIEALFASGPL 346

Query: 13  SWEK 2
           SWE+
Sbjct: 347 SWEQ 350


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