BLASTX nr result

ID: Atractylodes22_contig00030236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030236
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation...   212   3e-53
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation...   209   2e-52
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   209   2e-52
gb|ABB29949.1| unknown [Solanum tuberosum]                            207   9e-52
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c...   202   2e-50

>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
           [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
           protein product [Vitis vinifera]
          Length = 410

 Score =  212 bits (539), Expect = 3e-53
 Identities = 100/133 (75%), Positives = 117/133 (87%)
 Frame = -2

Query: 402 QECMIAGRWLDLASLMLTSADLVFSKASEKDLECIFTVICNLVQKPENLDESVEMAKLLS 223
           QECM+ GRWLDLASLMLTSADL+FSKAS+KDLECIFTVICNLV K E+ DE++EMAK +S
Sbjct: 45  QECMVRGRWLDLASLMLTSADLMFSKASDKDLECIFTVICNLVTKSESPDEALEMAKFIS 104

Query: 222 TKIAQQPHEKPALRLKILFNLYNMLENPYGRFFVYMKALIVAANGKAMEHIVPSFKKIDT 43
            KI QQP++K ALRLKILFNLYN+LENPY RF+VYMKAL +A NGK  EHI+PSFK +D+
Sbjct: 105 AKITQQPNDKAALRLKILFNLYNLLENPYSRFYVYMKALNLAVNGKVTEHIIPSFKMMDS 164

Query: 42  LLKEWNLGLQDQR 4
            LKEWN+G+ DQR
Sbjct: 165 FLKEWNIGILDQR 177


>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           M-like [Cucumis sativus]
          Length = 410

 Score =  209 bits (531), Expect = 2e-52
 Identities = 98/134 (73%), Positives = 117/134 (87%)
 Frame = -2

Query: 402 QECMIAGRWLDLASLMLTSADLVFSKASEKDLECIFTVICNLVQKPENLDESVEMAKLLS 223
           QECM+ GRWLDLASLMLTSADL+FSK SEKDLEC+FT+ICNLV K  + DES+EMAKL+S
Sbjct: 45  QECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLIS 104

Query: 222 TKIAQQPHEKPALRLKILFNLYNMLENPYGRFFVYMKALIVAANGKAMEHIVPSFKKIDT 43
            KI QQP++KPALRLKILFNLYN+LENPY RF VYMKAL +A  GKA EHI+P+ KKI++
Sbjct: 105 AKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIES 164

Query: 42  LLKEWNLGLQDQRE 1
            L+EWN+G+ +QRE
Sbjct: 165 FLREWNIGIVEQRE 178


>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit M-like [Cucumis sativus]
          Length = 417

 Score =  209 bits (531), Expect = 2e-52
 Identities = 98/134 (73%), Positives = 117/134 (87%)
 Frame = -2

Query: 402 QECMIAGRWLDLASLMLTSADLVFSKASEKDLECIFTVICNLVQKPENLDESVEMAKLLS 223
           QECM+ GRWLDLASLMLTSADL+FSK SEKDLEC+FT+ICNLV K  + DES+EMAKL+S
Sbjct: 45  QECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLIS 104

Query: 222 TKIAQQPHEKPALRLKILFNLYNMLENPYGRFFVYMKALIVAANGKAMEHIVPSFKKIDT 43
            KI QQP++KPALRLKILFNLYN+LENPY RF VYMKAL +A  GKA EHI+P+ KKI++
Sbjct: 105 AKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIES 164

Query: 42  LLKEWNLGLQDQRE 1
            L+EWN+G+ +QRE
Sbjct: 165 FLREWNIGIVEQRE 178


>gb|ABB29949.1| unknown [Solanum tuberosum]
          Length = 410

 Score =  207 bits (526), Expect = 9e-52
 Identities = 96/134 (71%), Positives = 117/134 (87%)
 Frame = -2

Query: 402 QECMIAGRWLDLASLMLTSADLVFSKASEKDLECIFTVICNLVQKPENLDESVEMAKLLS 223
           Q+CMI GRWLDL SLML SAD++FSKASEKDLEC+FT++CNLV+KPE+LD+  EMA+L+S
Sbjct: 45  QKCMIEGRWLDLVSLMLASADIIFSKASEKDLECVFTIMCNLVKKPESLDQVHEMAELIS 104

Query: 222 TKIAQQPHEKPALRLKILFNLYNMLENPYGRFFVYMKALIVAANGKAMEHIVPSFKKIDT 43
            KI QQP++KPALRLKILFNLYN+LENPY RF VY+K+L +A  GK  EHI+PS KK+D 
Sbjct: 105 AKIIQQPNDKPALRLKILFNLYNLLENPYSRFCVYLKSLNLATAGKVTEHILPSIKKMDN 164

Query: 42  LLKEWNLGLQDQRE 1
            LKEWNLG++DQRE
Sbjct: 165 FLKEWNLGVKDQRE 178


>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
           gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
           putative [Ricinus communis]
          Length = 412

 Score =  202 bits (515), Expect = 2e-50
 Identities = 98/136 (72%), Positives = 118/136 (86%), Gaps = 2/136 (1%)
 Frame = -2

Query: 402 QECMIAGRWLDLASLMLTSADLVFS--KASEKDLECIFTVICNLVQKPENLDESVEMAKL 229
           QECM+ GRWLDLASL+LTSAD++FS  K SEKDLECIFTVICNLV KP++ DE++EMAKL
Sbjct: 45  QECMVIGRWLDLASLILTSADVIFSNSKVSEKDLECIFTVICNLVTKPDSPDEALEMAKL 104

Query: 228 LSTKIAQQPHEKPALRLKILFNLYNMLENPYGRFFVYMKALIVAANGKAMEHIVPSFKKI 49
           +  KI QQP +KPALRLKILFNLYN+LE+PY RF+VY+KAL +A NGK  EH+VPSFK I
Sbjct: 105 ICGKIIQQPADKPALRLKILFNLYNLLESPYSRFYVYLKALDLALNGKVTEHMVPSFKTI 164

Query: 48  DTLLKEWNLGLQDQRE 1
           ++ LKEWNL ++DQRE
Sbjct: 165 ESFLKEWNLEVKDQRE 180


Top