BLASTX nr result

ID: Atractylodes22_contig00030227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030227
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...   116   2e-24
ref|XP_003518607.1| PREDICTED: SKP1-interacting partner 15-like ...   103   1e-20
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub...    99   4e-19
ref|XP_002307489.1| f-box family protein [Populus trichocarpa] g...    97   1e-18
ref|XP_002533016.1| hypothetical protein RCOM_1170580 [Ricinus c...    97   2e-18

>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/72 (76%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = -1

Query: 241 EMFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWE-SNEKEKEEWRWIDGVPGNGDGLYR 65
           EMFR FQESSKFKVFG GNRVCFSAKR+GRLALW+ S E  K +WRWI+GVPGNGDGL+R
Sbjct: 303 EMFRCFQESSKFKVFGAGNRVCFSAKRVGRLALWDYSTETGKGDWRWINGVPGNGDGLFR 362

Query: 64  GFPFDARLDTSP 29
           GF F ARL   P
Sbjct: 363 GFVFQARLTALP 374


>ref|XP_003518607.1| PREDICTED: SKP1-interacting partner 15-like [Glycine max]
          Length = 367

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/72 (66%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -1

Query: 241 EMFRFFQESSKFKVFGG-GNRVCFSAKRIGRLALWESNEKEKEEWRWIDGVPGNGDGLYR 65
           EMFR F+ES+KFKVFGG G+ VCFSAKRIG+LALW+    E  EWRWID +P NG GLYR
Sbjct: 296 EMFRAFRESTKFKVFGGAGDMVCFSAKRIGKLALWDRRASEGHEWRWIDNLPENGKGLYR 355

Query: 64  GFPFDARLDTSP 29
           GF F+ RL+  P
Sbjct: 356 GFVFEGRLNAVP 367


>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333503|gb|EFH63921.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/72 (66%), Positives = 56/72 (77%)
 Frame = -1

Query: 244 VEMFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWESNEKEKEEWRWIDGVPGNGDGLYR 65
           +EM+R FQESSKFKVFGGG+RV FSAKR+G+LA+W+      E WRWIDGVPG  DGL R
Sbjct: 307 LEMYRGFQESSKFKVFGGGDRVYFSAKRMGKLAMWDC----WEGWRWIDGVPGYADGLCR 362

Query: 64  GFPFDARLDTSP 29
           GF FDA+L   P
Sbjct: 363 GFVFDAKLTMMP 374


>ref|XP_002307489.1| f-box family protein [Populus trichocarpa]
           gi|222856938|gb|EEE94485.1| f-box family protein
           [Populus trichocarpa]
          Length = 374

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/67 (65%), Positives = 55/67 (82%)
 Frame = -1

Query: 241 EMFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWESNEKEKEEWRWIDGVPGNGDGLYRG 62
           EM++ FQESSKFK+FGGG+RVC SAKR+G+LALW+  + +   WRWI+GVPG GDGL RG
Sbjct: 306 EMYKSFQESSKFKIFGGGDRVCLSAKRVGKLALWD--DCDGVVWRWIEGVPGGGDGLCRG 363

Query: 61  FPFDARL 41
           F F+A L
Sbjct: 364 FVFEASL 370


>ref|XP_002533016.1| hypothetical protein RCOM_1170580 [Ricinus communis]
           gi|223527205|gb|EEF29370.1| hypothetical protein
           RCOM_1170580 [Ricinus communis]
          Length = 78

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
 Frame = -1

Query: 244 VEMFRFFQESSKFKVFGGGNRVCFSAKRIGRLALWESNEKEKEEWRWIDGVP----GNGD 77
           VEM+R FQESSK KVFGGG+RVCFSAKR+G+LALW     +   WRWIDG P      GD
Sbjct: 3   VEMYRCFQESSKLKVFGGGDRVCFSAKRLGKLALWVDCGGDTSCWRWIDGAPCGVGSGGD 62

Query: 76  GLYRGFPFDARLDTSP 29
           GL+RGF F+A L   P
Sbjct: 63  GLWRGFVFEATLTALP 78


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