BLASTX nr result

ID: Atractylodes22_contig00030211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030211
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282407.2| PREDICTED: uncharacterized protein LOC100243...    59   5e-07
emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera]    59   5e-07
emb|CBI16790.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002282407.2| PREDICTED: uncharacterized protein LOC100243914 [Vitis vinifera]
          Length = 491

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 96  RKSVECTRHTVTITVGILFGFFIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 275
           RK  E  R  VTI+VG++FGF IG S                                  
Sbjct: 101 RKPNETMRLIVTISVGVVFGFLIGISFPTLSITKLNLPSSLL------------------ 142

Query: 276 PPID-TYLWDKNSGHSAQTILNVISVTRDNISKEAQTITDPSKIWVSSNPRGAER 437
           P +D  Y+ DK+SG S Q +L+ +S  + N + +AQ +   SKIW  SNPRGAER
Sbjct: 143 PNVDIAYIRDKSSGFSTQALLDALSSAKYNRT-QAQNLNGTSKIWAPSNPRGAER 196


>emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera]
          Length = 718

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 96  RKSVECTRHTVTITVGILFGFFIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 275
           RK  E  R  VTI+VG++FGF IG S                                  
Sbjct: 14  RKPNETMRLIVTISVGVVFGFLIGISFPTLSITKLNLPSSLL------------------ 55

Query: 276 PPID-TYLWDKNSGHSAQTILNVISVTRDNISKEAQTITDPSKIWVSSNPRGAER 437
           P +D  Y+ DK+SG S Q +L+ +S  + N + +AQ +   SKIW  SNPRGAER
Sbjct: 56  PNVDIAYIRDKSSGFSTQALLDALSSAKYNRT-QAQNLNGTSKIWAPSNPRGAER 109


>emb|CBI16790.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 RHTVTITVGILFGFFIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPID-TY 293
           R  VTI+VG++FGF IG S                                  P +D  Y
Sbjct: 2   RLIVTISVGVVFGFLIGISFPTLSITKLNLPSSLL------------------PNVDIAY 43

Query: 294 LWDKNSGHSAQTILNVISVTRDNISKEAQTITDPSKIWVSSNPRGAER 437
           + DK+SG S Q +L+ +S  + N + +AQ +   SKIW  SNPRGAER
Sbjct: 44  IRDKSSGFSTQALLDALSSAKYNRT-QAQNLNGTSKIWAPSNPRGAER 90


Top