BLASTX nr result

ID: Atractylodes22_contig00030154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030154
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...    76   3e-12
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]    76   3e-12
emb|CBI36671.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...    68   9e-10

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/40 (90%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 LQEANEGMTLNVQDIDAYWLQRKISQAYEHQIDSQQSQKL 3
           +QEANEGMTLNVQDIDAYWLQRKISQAYE QID QQ QKL
Sbjct: 266 MQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 305


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/40 (90%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 LQEANEGMTLNVQDIDAYWLQRKISQAYEHQIDSQQSQKL 3
           +QEANEGMTLNVQDIDAYWLQRKISQAYE QID QQ QKL
Sbjct: 266 MQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 305


>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
          Length = 1405

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/38 (92%), Positives = 35/38 (92%)
 Frame = -3

Query: 116 EANEGMTLNVQDIDAYWLQRKISQAYEHQIDSQQSQKL 3
           EANEGMTLNVQDIDAYWLQRKISQAYE QID QQ QKL
Sbjct: 196 EANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 233


>ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|222859398|gb|EEE96945.1|
           predicted protein [Populus trichocarpa]
          Length = 2175

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = -3

Query: 122 LQEANEGMTLNVQDIDAYWLQRKISQAYEHQIDSQQSQKL 3
           ++ ANEGM LNVQDIDAYWLQRKISQAYE QID QQ QKL
Sbjct: 269 MRGANEGMNLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 308


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
           200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = -3

Query: 122 LQEANEGMTLNVQDIDAYWLQRKISQAYEHQIDSQQSQKL 3
           LQE + GM LNVQDIDAYWLQRKISQAYE QID QQ QKL
Sbjct: 264 LQENDGGMNLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 303


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