BLASTX nr result

ID: Atractylodes22_contig00030152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030152
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...   106   4e-21
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    95   1e-17
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    95   1e-17
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    92   1e-16
gb|AAM65208.1| unknown [Arabidopsis thaliana]                          83   4e-14

>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score =  106 bits (265), Expect = 4e-21
 Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = +1

Query: 355 SLPKVKLPIFEGIDPRGWITKAELYFQV-NQTPPHKLNLVQMCMDGPALHWYTNLLSKHP 531
           S+ KV+L +F G DP GWI +AE+YF V N TP  K+NL Q+CMDGP +H++  LL ++ 
Sbjct: 80  SVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENE 139

Query: 532 TTDWDQFRNKLMVRFSGTKFRNAHEALGSLFQEGSVDEYIEEFESL 669
           T  W+  ++ L+ R+ G    N  E L +L QEG+++EYI +FE L
Sbjct: 140 TLTWEDLKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERL 185


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = +1

Query: 364 KVKLPIFEGIDPRGWITKAELYFQVNQTPPH-KLNLVQMCMDGPALHWYTNLLSKHPTTD 540
           KVKLP+F+G DP  WIT+AE+YF V  T    ++ L ++ M+G  +HW+  L+       
Sbjct: 73  KVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELS 132

Query: 541 WDQFRNKLMVRFSGTKFRNAHEALGSLFQEGSVDEYIEEFESLS 672
           W+  +  L+ R+ G +  N  E L +L Q+GSV+E++E FE LS
Sbjct: 133 WENLKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLS 176


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +1

Query: 364  KVKLPIFEGIDPRGWITKAELYFQVNQTPPH-KLNLVQMCMDGPALHWYTNLLSKHPTTD 540
            KVKLP+FEG DP  WIT+AE+YF V  TP   ++ L ++ M+GP +HW+  L+       
Sbjct: 746  KVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLS 805

Query: 541  WDQFRNKLMVRFSGTKFRNAHEALGSLFQEGSVDEYIEEFESLS 672
             ++ +  L+ R+ G +  N  E L +L Q GSV+E++E FE LS
Sbjct: 806  REKLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLS 849


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = +1

Query: 364 KVKLPIFEGIDPRGWITKAELYFQV-NQTPPHKLNLVQMCMDGPALHWYTNLLSKHPTTD 540
           KVKLP+FEG D   WIT+ E+YF V N T   ++ L ++ M+G  +HW+  L+       
Sbjct: 56  KVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELS 115

Query: 541 WDQFRNKLMVRFSGTKFRNAHEALGSLFQEGSVDEYIEEFESLS 672
           W++ +  L+ R+ G +  N  E L ++ Q+GSV+E++E FE LS
Sbjct: 116 WEKLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLS 159


>gb|AAM65208.1| unknown [Arabidopsis thaliana]
          Length = 272

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = +1

Query: 361 PKVKLPIFEGIDPRGWITKAELYFQVNQ-TPPHKLNLVQMCMDGPALHWYTNLLSKHPTT 537
           PK+++P+FEG +   W+T+AE YF+    T   K+ LV M ++GPAL W+ NL +++P  
Sbjct: 112 PKIEMPVFEGPNVNSWLTRAERYFEFGSFTNAEKIQLVYMSVEGPALCWF-NLENRNPFV 170

Query: 538 DWDQFRNKLMVRFSGTKFRNAHEALGSLFQEGSVDEYIEEFESLS 672
           DW+ F+ +++ RF     R+A E L +L Q  SV  Y+ EFE LS
Sbjct: 171 DWNDFKARVLQRFGDP--RSAMERLLTLKQVDSVISYLGEFEDLS 213


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