BLASTX nr result

ID: Atractylodes22_contig00030120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030120
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              470   e-130
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   463   e-128
ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   454   e-125
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from...   441   e-121

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  470 bits (1209), Expect = e-130
 Identities = 227/300 (75%), Positives = 258/300 (86%)
 Frame = +3

Query: 6    FDAKGIETVRRDTCGAVSKTMERSLRNYFENQDISKLKSYLLRQWSRILSGRVSIQDFVF 185
            FDAKGIETVRRDTCGAV+KTME+SLR +FE+QDISK+K YL RQW RILSGRVS+QDFVF
Sbjct: 1435 FDAKGIETVRRDTCGAVAKTMEQSLRLFFEHQDISKVKVYLQRQWRRILSGRVSLQDFVF 1494

Query: 186  AKEVRLGTYSSRVSSLPPAAIVATKAIRADPRAEPRYAERIPYVVVHGEPGARXXXXXXX 365
            AKEVRLGTYSSR SSLPPAAIVA KA+RADPRAEP YAER+PYVV+HGEPGAR       
Sbjct: 1495 AKEVRLGTYSSRASSLPPAAIVAIKAMRADPRAEPCYAERVPYVVIHGEPGARLVDLVVD 1554

Query: 366  XXXXXXXXSPYRLNDLYYINKQIIPALQRVFGLIGVDLNQWFLDMPRPVRESVAKIQSYA 545
                    SPYRLND YYINKQIIPALQRVFGL+G DL QWF +MPRPVRE  AK +S+A
Sbjct: 1555 PLDLLAIDSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPVREVYAKHKSHA 1614

Query: 546  LNPHRTRIDYYYLSKHCIMCGELVQASAAAPLCGKCSRNEAAVAVAVTGRTSKMEREIQH 725
             NP+RTRID+YYLSKHCI+CGEL  + A+A +C KCS++  AVA AV GRT+K+ER+IQH
Sbjct: 1615 PNPYRTRIDFYYLSKHCILCGEL--SPASAHICDKCSKDGTAVAAAVIGRTAKLERDIQH 1672

Query: 726  LAAICRHCGGGDWVIESGVKCTSLACSIFYERRKVQKGLQSLSTIATESGFYPKCVAEWF 905
            LAAICRHCGGGDW++ESGVKCTSLACS+FYERRKVQK LQ LS++ATE+GFYPKC+ EWF
Sbjct: 1673 LAAICRHCGGGDWIVESGVKCTSLACSVFYERRKVQKDLQGLSSVATEAGFYPKCMVEWF 1732


>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  463 bits (1192), Expect = e-128
 Identities = 225/298 (75%), Positives = 256/298 (85%)
 Frame = +3

Query: 6    FDAKGIETVRRDTCGAVSKTMERSLRNYFENQDISKLKSYLLRQWSRILSGRVSIQDFVF 185
            FDAKGIETVRRDTCGAV+KTME+SLR +FE+QDISK+K YL RQW RILSGRVS+QDFVF
Sbjct: 878  FDAKGIETVRRDTCGAVAKTMEQSLRLFFEHQDISKVKVYLQRQWRRILSGRVSLQDFVF 937

Query: 186  AKEVRLGTYSSRVSSLPPAAIVATKAIRADPRAEPRYAERIPYVVVHGEPGARXXXXXXX 365
            AKEVRLGTYSSR SSLPPAAIVA KA+RADPRAEP YAER+PYVV+HGEPGAR       
Sbjct: 938  AKEVRLGTYSSRASSLPPAAIVAIKAMRADPRAEPCYAERVPYVVIHGEPGARLVDLVVD 997

Query: 366  XXXXXXXXSPYRLNDLYYINKQIIPALQRVFGLIGVDLNQWFLDMPRPVRESVAKIQSYA 545
                    SPYRLND YYINKQIIPALQRVFGL+G DL QWF +MPRPVRE  AK +S+A
Sbjct: 998  PLDLLAIDSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPVREVYAKHKSHA 1057

Query: 546  LNPHRTRIDYYYLSKHCIMCGELVQASAAAPLCGKCSRNEAAVAVAVTGRTSKMEREIQH 725
             NP+RTRID+YYLSKHCI+CGEL  + A+A +C KCS++  AVA AV GRT+K+ER+IQH
Sbjct: 1058 PNPYRTRIDFYYLSKHCILCGEL--SPASAHICDKCSKDGTAVAAAVIGRTAKLERDIQH 1115

Query: 726  LAAICRHCGGGDWVIESGVKCTSLACSIFYERRKVQKGLQSLSTIATESGFYPKCVAE 899
            LAAICRHCGGGDW++ESGVKCTSLACS+FYERRKVQK LQ LS++ATE+GFYPKC+ E
Sbjct: 1116 LAAICRHCGGGDWIVESGVKCTSLACSVFYERRKVQKDLQGLSSVATEAGFYPKCMVE 1173


>ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|222857393|gb|EEE94940.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  456 bits (1173), Expect = e-126
 Identities = 218/302 (72%), Positives = 256/302 (84%), Gaps = 1/302 (0%)
 Frame = +3

Query: 3    VFDAKGIETVRRDTCGAVSKTMERSLRNYFENQDISKLKSYLLRQWSRILSGRVSIQDFV 182
            +FDAKGIETVRRDTCGAV+K ME+SLR +FE++DIS++K+YL RQW+RILSGRVS+QDFV
Sbjct: 461  MFDAKGIETVRRDTCGAVAKIMEQSLRIFFEHEDISEVKTYLQRQWTRILSGRVSLQDFV 520

Query: 183  FAKEVRLGTYSSRVSS-LPPAAIVATKAIRADPRAEPRYAERIPYVVVHGEPGARXXXXX 359
            FAKEVRLGTYS+R S+ LPPAAIVATKA+R DPRAEP YAER+PYVV+HGEPGAR     
Sbjct: 521  FAKEVRLGTYSTRASAALPPAAIVATKAMRTDPRAEPCYAERVPYVVIHGEPGARLVDMV 580

Query: 360  XXXXXXXXXXSPYRLNDLYYINKQIIPALQRVFGLIGVDLNQWFLDMPRPVRESVAKIQS 539
                      SP+RLND+YYI KQIIPALQRVFGL+G DLNQWF +MPRP RE+++K  S
Sbjct: 581  VDPLDLLAIDSPFRLNDVYYITKQIIPALQRVFGLLGADLNQWFSEMPRPAREALSKRPS 640

Query: 540  YALNPHRTRIDYYYLSKHCIMCGELVQASAAAPLCGKCSRNEAAVAVAVTGRTSKMEREI 719
            YA NP RTRIDYYYLSKHC++CGELVQAS  A +C KCS+ E A A AV GRTSK+E+E+
Sbjct: 641  YAPNPQRTRIDYYYLSKHCVLCGELVQAS--AHICNKCSQREIAAATAVIGRTSKLEKEM 698

Query: 720  QHLAAICRHCGGGDWVIESGVKCTSLACSIFYERRKVQKGLQSLSTIATESGFYPKCVAE 899
            QHLAAICRHCGGGDW++ESG+KCTSLACS+FYERRKVQ+ LQ LS +A + G YPKC+ E
Sbjct: 699  QHLAAICRHCGGGDWLLESGIKCTSLACSVFYERRKVQRELQGLSAVAGDVGLYPKCMVE 758

Query: 900  WF 905
            WF
Sbjct: 759  WF 760


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  454 bits (1167), Expect = e-125
 Identities = 219/298 (73%), Positives = 251/298 (84%), Gaps = 1/298 (0%)
 Frame = +3

Query: 3    VFDAKGIETVRRDTCGAVSKTMERSLRNYFENQDISKLKSYLLRQWSRILSGRVSIQDFV 182
            VFDAKGIETVRRDTCGAV+K +E+SLR +FE+QDIS++K YL RQW+RILSGRVS+QDF+
Sbjct: 898  VFDAKGIETVRRDTCGAVAKMLEQSLRLFFEHQDISEIKGYLQRQWTRILSGRVSLQDFI 957

Query: 183  FAKEVRLGTYSSRV-SSLPPAAIVATKAIRADPRAEPRYAERIPYVVVHGEPGARXXXXX 359
            FAKEVRLGTYS+R  SSLPPAAI+ATKA++ DPRAEPRYAER+PYVV+HGEPGAR     
Sbjct: 958  FAKEVRLGTYSTRAASSLPPAAILATKAMKVDPRAEPRYAERVPYVVIHGEPGARLVDMV 1017

Query: 360  XXXXXXXXXXSPYRLNDLYYINKQIIPALQRVFGLIGVDLNQWFLDMPRPVRESVAKIQS 539
                      SPYRLND+YYI+KQIIPALQRVFGL+G DLNQWFL+MPRP R++ AK  S
Sbjct: 1018 VDPLDLLAIDSPYRLNDIYYISKQIIPALQRVFGLLGADLNQWFLEMPRPGRDTYAKRPS 1077

Query: 540  YALNPHRTRIDYYYLSKHCIMCGELVQASAAAPLCGKCSRNEAAVAVAVTGRTSKMEREI 719
            Y  NP RTRIDYYYLSKHC++C ELV AS    LC KCS+ E A A AV GRTSK+ERE+
Sbjct: 1078 YGSNPQRTRIDYYYLSKHCVLCDELVNASTR--LCNKCSQKETAAATAVIGRTSKLEREM 1135

Query: 720  QHLAAICRHCGGGDWVIESGVKCTSLACSIFYERRKVQKGLQSLSTIATESGFYPKCV 893
            QHLAAICRHCGGGDW++ESGVKCTSLACS+FYERRKVQK LQ LS IA + GFYPKC+
Sbjct: 1136 QHLAAICRHCGGGDWLLESGVKCTSLACSVFYERRKVQKELQGLSLIAADKGFYPKCM 1193


>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
            [Arabidopsis thaliana]
          Length = 1894

 Score =  441 bits (1135), Expect = e-121
 Identities = 212/302 (70%), Positives = 251/302 (83%), Gaps = 1/302 (0%)
 Frame = +3

Query: 3    VFDAKGIETVRRDTCGAVSKTMERSLRNYFENQDISKLKSYLLRQWSRILSGRVSIQDFV 182
            +FDAKGIETVRRDTC AV+KTME+SLR +FE ++ISK+KSYL RQW RILSGRVS+QDF+
Sbjct: 1595 IFDAKGIETVRRDTCEAVAKTMEQSLRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFI 1654

Query: 183  FAKEVRLGTYSSRVSSL-PPAAIVATKAIRADPRAEPRYAERIPYVVVHGEPGARXXXXX 359
            FAKEVRLGTYS+R SSL PPAAIVATK+++ADPR EPRYAER+PYVV+HGEPGAR     
Sbjct: 1655 FAKEVRLGTYSTRDSSLLPPAAIVATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMV 1714

Query: 360  XXXXXXXXXXSPYRLNDLYYINKQIIPALQRVFGLIGVDLNQWFLDMPRPVRESVAKIQS 539
                      +PYRLNDLYYINKQIIPALQRVFGL+G DLNQWFL+MPR  R S+ +   
Sbjct: 1715 VDPLVLLDVDTPYRLNDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPL 1774

Query: 540  YALNPHRTRIDYYYLSKHCIMCGELVQASAAAPLCGKCSRNEAAVAVAVTGRTSKMEREI 719
             + N H+TRIDY+YLSKHCI+CGE+VQ S  A LC +C +N++A A  +  +TSK+ERE+
Sbjct: 1775 NSKNSHKTRIDYFYLSKHCILCGEVVQES--AQLCNRCLQNKSAAAATIVWKTSKLEREM 1832

Query: 720  QHLAAICRHCGGGDWVIESGVKCTSLACSIFYERRKVQKGLQSLSTIATESGFYPKCVAE 899
            QHLA ICRHCGGGDWV++SGVKC SLACS+FYERRKVQK L+ LS+IATES  YPKC+AE
Sbjct: 1833 QHLATICRHCGGGDWVVQSGVKCNSLACSVFYERRKVQKELRGLSSIATESELYPKCMAE 1892

Query: 900  WF 905
            WF
Sbjct: 1893 WF 1894


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