BLASTX nr result

ID: Atractylodes22_contig00030084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030084
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]         72   5e-11
ref|XP_004143217.1| PREDICTED: uncharacterized protein LOC101206...    72   6e-11
ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arab...    70   1e-10
ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [M...    70   2e-10
ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...    68   7e-10

>dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1095

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = +1

Query: 31  IFGQSRKRRRFSHAPKLLPKEKVEVRSLKEGFQGSWHCGTVIE-RKNQIRVVKYEHILCD 207
           IFG +   RR     KLL  +K+EVRSL+EG  GSW+ GTV   +K + R ++Y++IL D
Sbjct: 10  IFGWNSTGRRNLRRKKLLDGDKIEVRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSD 69

Query: 208 DSSNNLVEFIPVLFAVDGKIPADWRPSDFPNYRGKIRPV 324
           D S NLVE + V   V+G    D        +RG++RPV
Sbjct: 70  DGSGNLVETVDVSDIVEG---LDDCTDVSDTFRGRLRPV 105


>ref|XP_004143217.1| PREDICTED: uncharacterized protein LOC101206451 [Cucumis sativus]
           gi|449525537|ref|XP_004169773.1| PREDICTED:
           uncharacterized LOC101206451 [Cucumis sativus]
          Length = 1317

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +1

Query: 37  GQSRKRRRFSHAPK-LLPKEKVEVRSLKEGFQGSWHCGTVIERKNQIRVVKYEHILCDDS 213
           G  RKR+R     + L+  EKVEVRSL++GF GSWH G V+   N +R+VKY+H+L DD 
Sbjct: 6   GTGRKRKRIRRTERRLVVDEKVEVRSLEDGFLGSWHGGVVVACDNGVRLVKYDHLLRDDG 65

Query: 214 SNNLVEFIPVLFAVD 258
           S  LV+ I V  ++D
Sbjct: 66  SGFLVDTISVSSSLD 80


>ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arabidopsis lyrata subsp.
           lyrata] gi|297312116|gb|EFH42540.1| hypothetical protein
           ARALYDRAFT_358079 [Arabidopsis lyrata subsp. lyrata]
          Length = 1047

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = +1

Query: 31  IFGQSRKRRRFSHAPKLLPKEKVEVRSLKEGFQGSWHCGTVIE-RKNQIRVVKYEHILCD 207
           IFG +    R     KLL  +K+EVRSL+EGF GSW+ GTV   RK + R ++Y++IL D
Sbjct: 10  IFGWNSTGGRNLRRKKLLVGDKIEVRSLEEGFLGSWYLGTVTSARKRRRRSIRYDNILSD 69

Query: 208 DSSNNLVEFIPVLFAVDGKIPADWRPSDFPNYRGKIRPV 324
           D +++LVE + V   V+G    D        +RG++RPV
Sbjct: 70  DGTDSLVETVDVSDVVEG---LDDCTDVSDTFRGRLRPV 105


>ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula]
           gi|355517044|gb|AES98667.1| Chromodomain
           helicase-DNA-binding protein [Medicago truncatula]
          Length = 1144

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/94 (42%), Positives = 57/94 (60%)
 Frame = +1

Query: 43  SRKRRRFSHAPKLLPKEKVEVRSLKEGFQGSWHCGTVIERKNQIRVVKYEHILCDDSSNN 222
           +RKR+R     KLL  EKVE+RSL++GF GSWH G ++    + R VKY++IL D+ S+ 
Sbjct: 12  NRKRKRRFLKRKLLVNEKVELRSLEDGFLGSWHPGKILRCGRKTRYVKYDNILDDEESDY 71

Query: 223 LVEFIPVLFAVDGKIPADWRPSDFPNYRGKIRPV 324
           L+E + V   +DG   +     D    RG IRP+
Sbjct: 72  LIEVVDVSSVLDGVNSSS--ALDCSYQRGLIRPL 103


>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/91 (42%), Positives = 53/91 (58%)
 Frame = +1

Query: 52  RRRFSHAPKLLPKEKVEVRSLKEGFQGSWHCGTVIERKNQIRVVKYEHILCDDSSNNLVE 231
           R R  +  KLL  E+VEVRS++EG  GSWH GT+I     +R VKY  IL D      +E
Sbjct: 53  RERTGNKRKLLVGEEVEVRSVEEGLLGSWHSGTIIGCDYLVRNVKYSEILDDRMGERFLE 112

Query: 232 FIPVLFAVDGKIPADWRPSDFPNYRGKIRPV 324
            + V  A++G    D   +D  N+RG+IRP+
Sbjct: 113 SVSVSGAIEGTSVVD---TDQCNHRGRIRPL 140


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