BLASTX nr result

ID: Atractylodes22_contig00030040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030040
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29999.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   137   7e-31
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   134   8e-30
ref|XP_003553435.1| PREDICTED: gamma-tubulin complex component 3...   130   1e-28
ref|XP_002322735.1| tubulin gamma complex-associated protein [Po...   130   1e-28

>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/103 (63%), Positives = 85/103 (82%), Gaps = 6/103 (5%)
 Frame = +2

Query: 11  DRLYEGIYEFRTRT------TKNKTKDAKHSKSKASETDPWVNEGRKAITQRAGEFLRNM 172
           DRLYEGI+E ++RT      +++KT+  +    K +E   W+++GRKA+TQRAGEFLRNM
Sbjct: 668 DRLYEGIHELQSRTMESLSPSRDKTRSRRLLNDKTAEPGAWISDGRKALTQRAGEFLRNM 727

Query: 173 GQDLDAVSKEYSSVLKGFISQLPMQQHINFKFLVFRLDFTEFY 301
           GQDLDA++KEYSS+L+GFISQLP+QQHI+ KFL+FRLDFTEFY
Sbjct: 728 GQDLDAIAKEYSSLLEGFISQLPVQQHIDLKFLLFRLDFTEFY 770


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis vinifera]
          Length = 854

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/103 (63%), Positives = 85/103 (82%), Gaps = 6/103 (5%)
 Frame = +2

Query: 11   DRLYEGIYEFRTRT------TKNKTKDAKHSKSKASETDPWVNEGRKAITQRAGEFLRNM 172
            DRLYEGI+E ++RT      +++KT+  +    K +E   W+++GRKA+TQRAGEFLRNM
Sbjct: 745  DRLYEGIHELQSRTMESLSPSRDKTRSRRLLNDKTAEPGAWISDGRKALTQRAGEFLRNM 804

Query: 173  GQDLDAVSKEYSSVLKGFISQLPMQQHINFKFLVFRLDFTEFY 301
            GQDLDA++KEYSS+L+GFISQLP+QQHI+ KFL+FRLDFTEFY
Sbjct: 805  GQDLDAIAKEYSSLLEGFISQLPVQQHIDLKFLLFRLDFTEFY 847


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223527963|gb|EEF30048.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 855

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/105 (59%), Positives = 85/105 (80%), Gaps = 6/105 (5%)
 Frame = +2

Query: 8    ADRLYEGIYEFRTRT------TKNKTKDAKHSKSKASETDPWVNEGRKAITQRAGEFLRN 169
            ADRLYEGI+E + RT      +++K K  + +  K+SE   W+++GRKA+TQRAGEFL+N
Sbjct: 745  ADRLYEGIHELQARTMASTLPSQDKKKSRRQATDKSSEPGSWISDGRKALTQRAGEFLQN 804

Query: 170  MGQDLDAVSKEYSSVLKGFISQLPMQQHINFKFLVFRLDFTEFYS 304
            MG +LD V+KEY+++LKGF+SQLP+QQH++ KFL+FRLDFTEFYS
Sbjct: 805  MGHELDTVAKEYTTLLKGFLSQLPVQQHVDLKFLLFRLDFTEFYS 849


>ref|XP_003553435.1| PREDICTED: gamma-tubulin complex component 3 homolog [Glycine max]
          Length = 842

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 8/106 (7%)
 Frame = +2

Query: 8    ADRLYEGIYEFRTRTTK--------NKTKDAKHSKSKASETDPWVNEGRKAITQRAGEFL 163
            ADRLYEGI+E + R T+        NK++  K    K++E   W+ +GRKA+TQRAGEFL
Sbjct: 730  ADRLYEGIHELQARITESSISSRDQNKSRSQKQLSEKSAEQGSWIADGRKALTQRAGEFL 789

Query: 164  RNMGQDLDAVSKEYSSVLKGFISQLPMQQHINFKFLVFRLDFTEFY 301
            RNM QDLDA++KEYSS+ +GFISQLP+QQH++ KFL FRLDF EFY
Sbjct: 790  RNMEQDLDAIAKEYSSLQEGFISQLPVQQHVDLKFLFFRLDFNEFY 835


>ref|XP_002322735.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222867365|gb|EEF04496.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 844

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/99 (62%), Positives = 82/99 (82%)
 Frame = +2

Query: 8    ADRLYEGIYEFRTRTTKNKTKDAKHSKSKASETDPWVNEGRKAITQRAGEFLRNMGQDLD 187
            ADRLYEGIYE +TR+ + +TKD      K+SE + W+N+GRKA+ +RAGEFL+NMGQ+L+
Sbjct: 747  ADRLYEGIYELQTRS-RRQTKD------KSSEPESWLNDGRKALEERAGEFLQNMGQELE 799

Query: 188  AVSKEYSSVLKGFISQLPMQQHINFKFLVFRLDFTEFYS 304
             +SKEY+ +L+GF+SQLPMQQH++ KFL FRLDF EFYS
Sbjct: 800  TISKEYTVLLEGFLSQLPMQQHVDLKFLFFRLDFAEFYS 838


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