BLASTX nr result

ID: Atractylodes22_contig00030035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030035
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...   133   6e-29
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...   125   2e-26
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   120   4e-25
ref|XP_002879814.1| hypothetical protein ARALYDRAFT_321659 [Arab...   108   2e-21
gb|AFK47290.1| unknown [Lotus japonicus]                              107   4e-21

>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
           gi|296086183|emb|CBI31624.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  133 bits (334), Expect = 6e-29
 Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 5/123 (4%)
 Frame = -2

Query: 839 FVSFLAKFCDISLRASSQGISPYNGQWEDIDTNMIWQPKTYALFIEDPFEQPLNCARAVS 660
           F+SFLAKF DI+ RAS QGI PY GQW DID+NM W P+TY LF+EDPFEQP N AR V 
Sbjct: 254 FISFLAKFVDITSRASEQGICPYTGQWVDIDSNMRWMPRTYELFVEDPFEQPENTARGVR 313

Query: 659 QRNLLKISQTFQSSHQKLTSANQNHP--LTVLVRPEVLSIISRSQVANFSNIG---VRIH 495
            R L +IS+ FQ++HQ+LTSANQ+    +  LVRP++   I R+   N S  G    R +
Sbjct: 314 SRQLQRISEAFQTTHQRLTSANQDQHSLIDTLVRPQIAQFIRRAPSRNSSAYGRNNSRTY 373

Query: 494 PQV 486
           P V
Sbjct: 374 PSV 376


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
           gi|223536493|gb|EEF38140.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 493

 Score =  125 bits (313), Expect = 2e-26
 Identities = 66/126 (52%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
 Frame = -2

Query: 839 FVSFLAKFCDISLRASSQGISPYNGQWEDIDTNMIWQPKTYALFIEDPFEQPLNCARAVS 660
           F+SF AKF  ISL+A+  GI  + GQW DI + M W PKTYALFIEDPFEQP N ARAVS
Sbjct: 254 FISFFAKFSGISLKAADLGICTFTGQWLDIRSTMRWLPKTYALFIEDPFEQPENAARAVS 313

Query: 659 QRNLLKISQTFQSSHQKLTSANQNHP--LTVLVRPEVLSIISRSQVANFSNIGVR---IH 495
             NL+KI++ FQ+++ KL  ANQN    L  LVRPE+L+ I+ + V N S   +     H
Sbjct: 314 AGNLVKIAEAFQTTYHKLVLANQNRTSLLGTLVRPEILNCIAGTPVRNLSYTSLHYQSTH 373

Query: 494 PQVHRN 477
           PQ+ ++
Sbjct: 374 PQISKS 379


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
           gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
           polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score =  120 bits (301), Expect = 4e-25
 Identities = 65/128 (50%), Positives = 82/128 (64%), Gaps = 8/128 (6%)
 Frame = -2

Query: 839 FVSFLAKFCDISLRASSQGISPYNGQWEDIDTNMIWQPKTYALFIEDPFEQPLNCARAVS 660
           FVSFLAKF DIS +AS  GI PY GQW  I++NM W PKTYA+F+EDPFEQP N ARA++
Sbjct: 250 FVSFLAKFSDISSKASELGICPYTGQWLKIESNMRWLPKTYAIFVEDPFEQPENTARAIN 309

Query: 659 QRNLLKISQTFQSSHQKLTSANQNHP--LTVLVRPEVLSIISRSQ------VANFSNIGV 504
            R L++IS+ F+ +H +LTS  QN    L  L RP++  +I  S         N  N   
Sbjct: 310 ARQLMRISEAFRMTHLRLTSVYQNRSSILNDLARPQISQLIINSSGSASAPAFNVENY-T 368

Query: 503 RIHPQVHR 480
            I PQVH+
Sbjct: 369 PIRPQVHQ 376


>ref|XP_002879814.1| hypothetical protein ARALYDRAFT_321659 [Arabidopsis lyrata subsp.
           lyrata] gi|297325653|gb|EFH56073.1| hypothetical protein
           ARALYDRAFT_321659 [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score =  108 bits (269), Expect = 2e-21
 Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -2

Query: 836 VSFLAKFCDISLRASSQGISPYNGQWEDIDTNMIWQPKTYALFIEDPFEQPLNCARAVSQ 657
           VSF AKF DI+L+A   G+ P+ G+WE+I +N  W PKTY+LF+EDPFEQP+N AR+VS+
Sbjct: 255 VSFYAKFSDINLKAQELGVCPFTGRWENISSNTTWLPKTYSLFVEDPFEQPVNAARSVSR 314

Query: 656 RNLLKISQTFQSSHQKLTS-ANQNHPLTVLVRPEVLSIISRSQVANFSNIGVRIHPQVHR 480
           RNL +I+Q FQ + ++L S  N+N  + VL    +   + R+         + +H Q H 
Sbjct: 315 RNLDRIAQVFQITSRRLVSDCNRNSIIGVLTGQHIQESLHRT---------ISLHSQQHA 365

Query: 479 N 477
           N
Sbjct: 366 N 366


>gb|AFK47290.1| unknown [Lotus japonicus]
          Length = 182

 Score =  107 bits (266), Expect = 4e-21
 Identities = 55/104 (52%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
 Frame = -2

Query: 797 ASSQGISPYNGQWEDIDTNMIWQPKTYALFIEDPFEQPLNCARAVSQRNLLKISQTFQSS 618
           AS  GI PY GQWE I  NMIW PKTYA+F+EDPFEQP N AR+VS   L KIS+ F  +
Sbjct: 5   ASELGICPYTGQWEQIKNNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLSKISEAFLRT 64

Query: 617 HQKLTSANQNHP--LTVLVRPEVLSIISRSQVANFSNIGVRIHP 492
           +  LTS NQN    LT L  PEV  +I +  + N++  G   HP
Sbjct: 65  YSVLTSKNQNQNSLLTFLAPPEVSRLIIKPVIPNYNGGGGYFHP 108


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