BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029947
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    72   5e-11
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...    67   2e-09
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      61   8e-08
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap...    60   2e-07
gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e...    59   4e-07

>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/105 (35%), Positives = 63/105 (60%)
 Frame = -2

Query: 322 GASICAFVLEMKGYFDRLESLNMMFDTELSINIILSGLPAVYNQFVLSYQMNGKETSIME 143
           G+ +   +++M GY   LE L      EL+ ++IL+ LPA Y QF+L++ MNG + ++ E
Sbjct: 217 GSPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDKNLTE 276

Query: 142 LHSLLQTAEQGIKKVDVPSSSAAPVLSIGQNAKKRKTSHSNWKGK 8
           LH LL+TAE  IKK++      + V+ + ++   +K + +  KGK
Sbjct: 277 LHMLLKTAEDSIKKIN------SHVMMVQKSTSFKKKARTWVKGK 315


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/106 (33%), Positives = 59/106 (55%)
 Frame = -2

Query: 322 GASICAFVLEMKGYFDRLESLNMMFDTELSINIILSGLPAVYNQFVLSYQMNGKETSIME 143
           G  +   V++M GY   LE L      EL+ ++IL+ LP  Y QF+L++ MNG + ++ E
Sbjct: 134 GGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDKNLTE 193

Query: 142 LHSLLQTAEQGIKKVDVPSSSAAPVLSIGQNAKKRKTSHSNWKGKA 5
           LH +L+TAE  +KK     ++   ++    + KK+  +    KGKA
Sbjct: 194 LHMMLKTAEGSVKK----CNNHVIMVQKSTSFKKKAKTWIKKKGKA 235


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/74 (36%), Positives = 44/74 (59%)
 Frame = -2

Query: 322 GASICAFVLEMKGYFDRLESLNMMFDTELSINIILSGLPAVYNQFVLSYQMNGKETSIME 143
           G  +   V++M GY + LE L      EL+ ++IL  LP  +  F+L+Y MN  + ++ E
Sbjct: 131 GNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRTLAE 190

Query: 142 LHSLLQTAEQGIKK 101
           LH +L+T E+ I+K
Sbjct: 191 LHGMLKTVEESIQK 204


>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
           gi|108709282|gb|ABF97077.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 262

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/74 (36%), Positives = 45/74 (60%)
 Frame = -2

Query: 322 GASICAFVLEMKGYFDRLESLNMMFDTELSINIILSGLPAVYNQFVLSYQMNGKETSIME 143
           G  +   V++M GY + L+ L      EL+ ++IL  LP  +  F++++ MN   +S+ E
Sbjct: 130 GNPVSLHVIKMIGYTESLDKLGCPLSRELATDLILQSLPPSFEPFIMNFNMNNLNSSLAE 189

Query: 142 LHSLLQTAEQGIKK 101
           LH +L+TAE+ IKK
Sbjct: 190 LHGMLKTAEESIKK 203


>gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 566

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/74 (37%), Positives = 44/74 (59%)
 Frame = -2

Query: 322 GASICAFVLEMKGYFDRLESLNMMFDTELSINIILSGLPAVYNQFVLSYQMNGKETSIME 143
           G  +   V++M G+ + LE L      EL+ ++IL  L A +   +L++ MNG E S+ E
Sbjct: 48  GNPVSPHVIKMIGHIESLEKLGFPLSQELATDVILQSLSASFEPVILNFHMNGMEKSMTE 107

Query: 142 LHSLLQTAEQGIKK 101
           LH +L+ AE+ IKK
Sbjct: 108 LHGMLKCAEESIKK 121