BLASTX nr result

ID: Atractylodes22_contig00029944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029944
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    89   4e-16
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    88   6e-16
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    85   5e-15
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    84   9e-15
emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    58   9e-07

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/98 (42%), Positives = 62/98 (63%)
 Frame = -2

Query: 295 FNIQATAPHLRIPLAQLSMSGVAQHWFAILKEIYPDLHWGQFTVELLQRFSGLEIQNPYE 116
           F++Q T   +R+ LA+LSM G   HWF +L E   +L W +    L+ R+ G  ++NP+E
Sbjct: 78  FDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGRRLENPFE 137

Query: 115 QLSAINQVGSILDYIDDFEYLLSLVPRLSEPQSLGYFV 2
           +LS I Q GS+ ++++ FE L S V RL E Q LGYF+
Sbjct: 138 ELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFM 175


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/98 (41%), Positives = 62/98 (63%)
 Frame = -2

Query: 295 FNIQATAPHLRIPLAQLSMSGVAQHWFAILKEIYPDLHWGQFTVELLQRFSGLEIQNPYE 116
           F++Q T+  +R+ LA+LSM G   HWF +L E   +L W      L+ R+ G  ++NP+E
Sbjct: 95  FDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLKRALIARYGGRRLENPFE 154

Query: 115 QLSAINQVGSILDYIDDFEYLLSLVPRLSEPQSLGYFV 2
           +LS + Q GS+ ++++ FE L S V RL E Q LGYF+
Sbjct: 155 ELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFM 192


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/98 (40%), Positives = 62/98 (63%)
 Frame = -2

Query: 295  FNIQATAPHLRIPLAQLSMSGVAQHWFAILKEIYPDLHWGQFTVELLQRFSGLEIQNPYE 116
            F++Q T   +R+ L++LSM G   HWF +L E   DL   +    L+ R+ G  ++NP+E
Sbjct: 768  FDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRRLENPFE 827

Query: 115  QLSAINQVGSILDYIDDFEYLLSLVPRLSEPQSLGYFV 2
            +LS + Q+GS+ ++++ FE L S V RL E Q LGYF+
Sbjct: 828  ELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFM 865


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/98 (44%), Positives = 60/98 (61%)
 Frame = -2

Query: 295 FNIQATAPHLRIPLAQLSMSGVAQHWFAILKEIYPDLHWGQFTVELLQRFSGLEIQNPYE 116
           FN+Q T P +++ LAQL M G   H+F  L E    L W      LL+R+ G+   N +E
Sbjct: 105 FNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGGVSDGNVFE 164

Query: 115 QLSAINQVGSILDYIDDFEYLLSLVPRLSEPQSLGYFV 2
           QLSA+ Q G+I +YI DFE L++ +P+L   Q LGYFV
Sbjct: 165 QLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFV 202


>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/98 (33%), Positives = 51/98 (52%)
 Frame = -2

Query: 295 FNIQATAPHLRIPLAQLSMSGVAQHWFAILKEIYPDLHWGQFTVELLQRFSGLEIQNPYE 116
           F  Q  A   ++PLA   + G AQ W+ ILKE   ++ W      L  R+   E  + + 
Sbjct: 179 FEFQKIAEEEKVPLATYHLEGEAQLWYQILKE-EGEVAWLTLKEGLNSRYGPTEFDDFFG 237

Query: 115 QLSAINQVGSILDYIDDFEYLLSLVPRLSEPQSLGYFV 2
            L+ + QVGS+ +Y   FE LLS V +L++ Q +  F+
Sbjct: 238 DLTRLKQVGSVREYQSQFEKLLSRVGKLNQSQQVACFI 275


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