BLASTX nr result

ID: Atractylodes22_contig00029941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029941
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vi...   327   3e-87
ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cuc...   324   2e-86
ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus ...   320   2e-85
ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|2...   311   1e-82
ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata sub...   303   2e-80

>ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vinifera]
           gi|296082395|emb|CBI21400.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  327 bits (837), Expect(2) = 3e-87
 Identities = 155/196 (79%), Positives = 178/196 (90%)
 Frame = +2

Query: 119 GGEAQIDRLPMDLLAHIFVFITCFKDLAQASSVCRKWREGVKQSMGRRERLSFAGWKMND 298
           G EA+I+RLPMDLLA+IFV +T F DLAQASSVCRKW++GVKQS+GRRE LSFAGW+M+D
Sbjct: 7   GEEAEIERLPMDLLANIFVMLTSFTDLAQASSVCRKWKQGVKQSLGRRESLSFAGWQMDD 66

Query: 299 ESTSRLVRHAYSLKELDISKSRWGCQITDNGLYQLSTAKCIINLSSISLWGMTGITDKGV 478
           +S +RL+RHAY LKELDIS+SRWGCQ+TDNGLY++S AKC+  L+SISLWG+TGITD GV
Sbjct: 67  DSIARLLRHAYGLKELDISRSRWGCQVTDNGLYKISLAKCVNKLTSISLWGVTGITDSGV 126

Query: 479 VQLISRANSLQHLNIGGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRK 658
           VQLISRA SLQHLNIGGTFITDESLFAIA SCP LKT VLW CRHVTENGL+VLV+KCRK
Sbjct: 127 VQLISRAISLQHLNIGGTFITDESLFAIAESCPCLKTIVLWSCRHVTENGLLVLVSKCRK 186

Query: 659 LESINVWGMRVPLDSF 706
           L+SINVWG RVP+D F
Sbjct: 187 LQSINVWGTRVPVDCF 202



 Score = 22.7 bits (47), Expect(2) = 3e-87
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +3

Query: 777 LLTIRPALQILPQTL 821
           LL IRPALQI P  L
Sbjct: 205 LLAIRPALQIKPGRL 219


>ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cucumis sativus]
           gi|449508293|ref|XP_004163274.1| PREDICTED: F-box
           protein At5g67140-like [Cucumis sativus]
          Length = 235

 Score =  324 bits (830), Expect = 2e-86
 Identities = 153/195 (78%), Positives = 174/195 (89%)
 Frame = +2

Query: 125 EAQIDRLPMDLLAHIFVFITCFKDLAQASSVCRKWREGVKQSMGRRERLSFAGWKMNDES 304
           E +IDRLP+DLLAHIF  IT F DLAQA  VCRKW+EGVK S+GRR+ LSFAGWKM+D S
Sbjct: 17  EPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMDDNS 76

Query: 305 TSRLVRHAYSLKELDISKSRWGCQITDNGLYQLSTAKCIINLSSISLWGMTGITDKGVVQ 484
           T+RL+RHAYSL+ELDIS+SRWGC ITD+GLY++S AKCI NL SISLWGM GITDKGVVQ
Sbjct: 77  TARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSISLWGMAGITDKGVVQ 136

Query: 485 LISRANSLQHLNIGGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLE 664
           LISRANSLQ+LNIGGTF+TD SL+AIA SCP+LKT VLW CRHVTE GL++LV+KCRKLE
Sbjct: 137 LISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLE 196

Query: 665 SINVWGMRVPLDSFI 709
           SINVWGMRVP+D FI
Sbjct: 197 SINVWGMRVPVDCFI 211


>ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223537183|gb|EEF38816.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 227

 Score =  320 bits (821), Expect = 2e-85
 Identities = 153/193 (79%), Positives = 172/193 (89%)
 Frame = +2

Query: 131 QIDRLPMDLLAHIFVFITCFKDLAQASSVCRKWREGVKQSMGRRERLSFAGWKMNDESTS 310
           +IDRLP+DLLAHIFV I  F DLA ASSVCRKW+EGVK+S+GRR  LSFAG KM+D ST+
Sbjct: 6   EIDRLPIDLLAHIFVLINSFTDLAHASSVCRKWKEGVKRSLGRRNSLSFAGLKMDDHSTA 65

Query: 311 RLVRHAYSLKELDISKSRWGCQITDNGLYQLSTAKCIINLSSISLWGMTGITDKGVVQLI 490
           R+VR+AYSLKELDIS+SRWGCQITDNGLY++S AKCI NL+SISLWGMTGITDKGVVQL+
Sbjct: 66  RVVRYAYSLKELDISRSRWGCQITDNGLYEISLAKCISNLTSISLWGMTGITDKGVVQLM 125

Query: 491 SRANSLQHLNIGGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLESI 670
           SRANSLQHLN+GGTFITDESL AIA SCPHLK+  LW CRHVTE GL+ LVNKCRKLESI
Sbjct: 126 SRANSLQHLNVGGTFITDESLCAIADSCPHLKSIGLWSCRHVTEIGLIYLVNKCRKLESI 185

Query: 671 NVWGMRVPLDSFI 709
           N WG RVP+D F+
Sbjct: 186 NAWGTRVPIDCFL 198


>ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|222855927|gb|EEE93474.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  311 bits (798), Expect = 1e-82
 Identities = 151/195 (77%), Positives = 171/195 (87%)
 Frame = +2

Query: 125 EAQIDRLPMDLLAHIFVFITCFKDLAQASSVCRKWREGVKQSMGRRERLSFAGWKMNDES 304
           EA+IDRLP+DL+A+IF FI  F DLAQASSVCRKW+EGVKQS+ +R  +SFAGWKM+D S
Sbjct: 5   EAEIDRLPIDLVAYIFGFIVSFTDLAQASSVCRKWKEGVKQSLAQRNSMSFAGWKMDDVS 64

Query: 305 TSRLVRHAYSLKELDISKSRWGCQITDNGLYQLSTAKCIINLSSISLWGMTGITDKGVVQ 484
           T+RLVR AY+LKELDIS+SRW CQITDNGLYQ+S A CI NL+SISLWGM  ITD+GVVQ
Sbjct: 65  TTRLVRLAYNLKELDISRSRWDCQITDNGLYQISLANCIGNLTSISLWGMARITDRGVVQ 124

Query: 485 LISRANSLQHLNIGGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLE 664
           LISRANSLQHLNIGGTF+TDESLFAIA SCP LK+ VLW CRHVTE GL+ L NKCRKLE
Sbjct: 125 LISRANSLQHLNIGGTFVTDESLFAIADSCPRLKSIVLWSCRHVTEIGLLNLANKCRKLE 184

Query: 665 SINVWGMRVPLDSFI 709
           SINVWG RVP++ FI
Sbjct: 185 SINVWGTRVPVNCFI 199


>ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310860|gb|EFH41284.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  303 bits (777), Expect(2) = 2e-80
 Identities = 145/195 (74%), Positives = 166/195 (85%)
 Frame = +2

Query: 125 EAQIDRLPMDLLAHIFVFITCFKDLAQASSVCRKWREGVKQSMGRRERLSFAGWKMNDES 304
           EA IDRLP+DLLA+IF  +T F  L QAS VC+KWR+ V QSM RRE LSFAGWKM+D+S
Sbjct: 4   EAAIDRLPLDLLAYIFSLVTSFTVLGQASGVCKKWRKAVNQSMARRESLSFAGWKMDDDS 63

Query: 305 TSRLVRHAYSLKELDISKSRWGCQITDNGLYQLSTAKCIINLSSISLWGMTGITDKGVVQ 484
           TSRLV  AY+LKELDIS+SRWGC ITDNGLYQ+++A+C+ NL+S+SLWGMT ITD GVVQ
Sbjct: 64  TSRLVHLAYNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSGVVQ 123

Query: 485 LISRANSLQHLNIGGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLE 664
           LISR +SLQHLNIGGTFITDESLFAIA  C HLKT  +W CRHVTE GL+VLVNKC KLE
Sbjct: 124 LISRTSSLQHLNIGGTFITDESLFAIAERCHHLKTIGMWCCRHVTERGLLVLVNKCGKLE 183

Query: 665 SINVWGMRVPLDSFI 709
           SIN+WG RVP+D FI
Sbjct: 184 SINLWGTRVPVDCFI 198



 Score = 23.1 bits (48), Expect(2) = 2e-80
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +3

Query: 777 LLTIRPALQILPQTL 821
           LLTI PALQI P  L
Sbjct: 200 LLTISPALQIKPMEL 214


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