BLASTX nr result

ID: Atractylodes22_contig00029927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029927
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604534.1| NBS-containing resistance-like protein [Medi...   229   7e-58
gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrat...   221   2e-55
gb|ABA99152.1| retrotransposon protein, putative, unclassified [...   215   1e-53
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc...   213   5e-53
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   213   6e-53

>ref|XP_003604534.1| NBS-containing resistance-like protein [Medicago truncatula]
           gi|355505589|gb|AES86731.1| NBS-containing
           resistance-like protein [Medicago truncatula]
          Length = 1302

 Score =  229 bits (584), Expect = 7e-58
 Identities = 112/151 (74%), Positives = 123/151 (81%)
 Frame = -2

Query: 604 GCPDTRRSTSGYCVFLGDDFISWSSKRQPTLSRSSAEAEYHGVANVVAKTSWLPNLLLEL 425
           GCPDTRRSTSGYCV+LGD+ ISWS+KRQ TLSRSSAEAEYHGVANVV+K+ W+ NLLLEL
Sbjct: 422 GCPDTRRSTSGYCVYLGDNLISWSAKRQHTLSRSSAEAEYHGVANVVSKSCWIRNLLLEL 481

Query: 424 YCPIQRAILVYCDNISAVYLSWNPVQHHRTKHIEMGIHLVREKVAVGQVRVLQVPSSSRY 245
           +CP   A LVYCDN+S VYLS NPVQH RTKHIEM IH VREKVA GQVRVL VPS  + 
Sbjct: 482 HCPATTATLVYCDNVSVVYLSGNPVQHQRTKHIEMDIHFVREKVARGQVRVLHVPSRYQI 541

Query: 244 ADIFTKGLPSTLFREFLSSLTVRPSPASTVG 152
           ADIFTKGLP  LF +F  SL +R  P ST G
Sbjct: 542 ADIFTKGLPLQLFDDFRDSLNIRQPPVSTTG 572


>gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrata subsp. petraea]
          Length = 471

 Score =  221 bits (562), Expect = 2e-55
 Identities = 106/151 (70%), Positives = 125/151 (82%)
 Frame = -2

Query: 604 GCPDTRRSTSGYCVFLGDDFISWSSKRQPTLSRSSAEAEYHGVANVVAKTSWLPNLLLEL 425
           GCPDTRRSTSGYCVFLG + ISWS+KRQPT SRSS EAEY GVAN VA+ +W+ NLLLE+
Sbjct: 319 GCPDTRRSTSGYCVFLGPNLISWSAKRQPTPSRSSTEAEYKGVANTVAELTWIRNLLLEI 378

Query: 424 YCPIQRAILVYCDNISAVYLSWNPVQHHRTKHIEMGIHLVREKVAVGQVRVLQVPSSSRY 245
           + PI  A +VYCDN+S+VYLS NPVQH RTKHIE+ IH VR+KVA+G+V+V  VP+S +Y
Sbjct: 379 HRPISAASIVYCDNVSSVYLSTNPVQHQRTKHIELDIHFVRDKVAIGEVKVFHVPTSLQY 438

Query: 244 ADIFTKGLPSTLFREFLSSLTVRPSPASTVG 152
           ADIFTKGLPST+  EF SSLTVR S  +T G
Sbjct: 439 ADIFTKGLPSTIHSEFRSSLTVRRSDDATAG 469


>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 989

 Score =  215 bits (548), Expect = 1e-53
 Identities = 107/149 (71%), Positives = 123/149 (82%)
 Frame = -2

Query: 604  GCPDTRRSTSGYCVFLGDDFISWSSKRQPTLSRSSAEAEYHGVANVVAKTSWLPNLLLEL 425
            GCPDTR+STSGY VFLGD+ ISWSSKRQ T+SRSSAEAEYH VAN VA+ SWL  LL EL
Sbjct: 832  GCPDTRKSTSGYAVFLGDNLISWSSKRQNTVSRSSAEAEYHAVANAVAEASWLHQLLSEL 891

Query: 424  YCPIQRAILVYCDNISAVYLSWNPVQHHRTKHIEMGIHLVREKVAVGQVRVLQVPSSSRY 245
              P+QRA LVYCDNISAVY+S NPVQH RTKHIE+ +H VRE VA+G VRVL VP++S+ 
Sbjct: 892  QSPLQRATLVYCDNISAVYMSANPVQHQRTKHIEIDLHFVREHVALGAVRVLHVPTTSQD 951

Query: 244  ADIFTKGLPSTLFREFLSSLTVRPSPAST 158
            ADIFTKG+PS+LF EF +SL VR + A T
Sbjct: 952  ADIFTKGVPSSLFTEFKTSLNVRCTDAQT 980


>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 976

 Score =  213 bits (542), Expect = 5e-53
 Identities = 104/151 (68%), Positives = 121/151 (80%)
 Frame = -2

Query: 604  GCPDTRRSTSGYCVFLGDDFISWSSKRQPTLSRSSAEAEYHGVANVVAKTSWLPNLLLEL 425
            GCPDTR+ST GY VFLGD+ ISWSSKRQ T+SRSSAEAEY  VAN VA+TSWL  LL EL
Sbjct: 824  GCPDTRKSTFGYAVFLGDNLISWSSKRQNTVSRSSAEAEYRAVANAVAETSWLRQLLHEL 883

Query: 424  YCPIQRAILVYCDNISAVYLSWNPVQHHRTKHIEMGIHLVREKVAVGQVRVLQVPSSSRY 245
            Y P  +A LVYCDN+SAVYLS NPVQH RTKH+E+ +H V E+V VG VRVL VP++S+Y
Sbjct: 884  YAPPSKATLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVHERVDVGAVRVLHVPTTSQY 943

Query: 244  ADIFTKGLPSTLFREFLSSLTVRPSPASTVG 152
            A++FTKGLPS +F EF SSL VR S  +T G
Sbjct: 944  ANVFTKGLPSPVFNEFRSSLNVRCSDVATAG 974


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  213 bits (541), Expect = 6e-53
 Identities = 105/151 (69%), Positives = 122/151 (80%)
 Frame = -2

Query: 604  GCPDTRRSTSGYCVFLGDDFISWSSKRQPTLSRSSAEAEYHGVANVVAKTSWLPNLLLEL 425
            GCPDTR+STSGY VFLGD+ +SWSSKRQ T+SRSSAEAEY  VAN VA+ SWL  LL EL
Sbjct: 1445 GCPDTRKSTSGYAVFLGDNLVSWSSKRQNTVSRSSAEAEYRAVANAVAEASWLRQLLHEL 1504

Query: 424  YCPIQRAILVYCDNISAVYLSWNPVQHHRTKHIEMGIHLVREKVAVGQVRVLQVPSSSRY 245
            + P  +A LVYCDN+SAVYLS NPVQH RTKH+++ +H VR+KVA+G VRVL VP+SS+Y
Sbjct: 1505 HSPPSKATLVYCDNVSAVYLSSNPVQHQRTKHVKIDLHFVRDKVALGAVRVLHVPTSSQY 1564

Query: 244  ADIFTKGLPSTLFREFLSSLTVRPSPASTVG 152
            ADIFTKGLPS +F EF SSL VR     TVG
Sbjct: 1565 ADIFTKGLPSPVFVEFRSSLNVRSINVVTVG 1595


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