BLASTX nr result

ID: Atractylodes22_contig00029923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029923
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   119   3e-25
ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   115   4e-24
ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   115   5e-24
ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   114   8e-24
ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   114   8e-24

>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  119 bits (299), Expect = 3e-25
 Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 32/166 (19%)
 Frame = -3

Query: 558 KINLEDKLTVILFDEDLYAKDSMCCVCLGEFEMNEKLHQIPSCQHVFHGDCIRNWLHSNT 379
           K  L+ KL  ILFD++L A+DS+CCVCLGEFE+ E+LHQ+PSC+HVFH DCI +WL +N+
Sbjct: 80  KGELKGKLPTILFDDELKARDSLCCVCLGEFEIKEELHQVPSCKHVFHADCIYHWLRTNS 139

Query: 378 TCPLCRCSVIIAAKDSHH-EPLVVPEPATTIMSSNSQEVPLE------------------ 256
           TCPLCRCSV    K  +   P+    P     + + Q V  +                  
Sbjct: 140 TCPLCRCSVFPNTKAGNPVSPVRSEHPDNQNSNQHRQNVSSQQQEENIGVRLDISDSSSG 199

Query: 255 HRVVIFEGSSSASI-------------DSKLSHPNEESVVVNVPIH 157
            ++V  +GSSS+S+             DS++ + ++ES+V+++  H
Sbjct: 200 QQMVPTDGSSSSSLREPGRSSELPTCMDSEMGYRDQESIVLHIETH 245


>ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 209

 Score =  115 bits (289), Expect = 4e-24
 Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
 Frame = -3

Query: 543 DKLTVILFDEDLYAKDSMCCVCLGEFEMNEKLHQIPSCQHVFHGDCIRNWLHSNTTCPLC 364
           DKL  ILFDEDL  +DS+CCVCLGEFE+NE+L QIP C HVFH  CI NWL SN+TCPLC
Sbjct: 90  DKLPRILFDEDLRTRDSVCCVCLGEFELNEELLQIPYCNHVFHISCICNWLQSNSTCPLC 149

Query: 363 RCSVIIAAKDSHHEPLVV---PEPATTIMSSNSQEVPLEHR 250
           RCS+I ++K  +  P ++   P     I  S+S  + L H+
Sbjct: 150 RCSIIPSSKFLNPAPPIIISDPPQQGGISGSSSHIMSLPHQ 190


>ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 206

 Score =  115 bits (288), Expect = 5e-24
 Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
 Frame = -3

Query: 543 DKLTVILFDEDLYAKDSMCCVCLGEFEMNEKLHQIPSCQHVFHGDCIRNWLHSNTTCPLC 364
           DKL  ILFDEDL   DS+CCVCLGEFE+ E+L QIP C+HVFH  CI NWL SN+TCPLC
Sbjct: 89  DKLPRILFDEDLRTGDSVCCVCLGEFELKEELLQIPYCKHVFHISCISNWLQSNSTCPLC 148

Query: 363 RCSVIIAAKDSHHEPLVVPEPATT--IMSSNSQEVPLEHRVVIFEGSSSASI 214
           RCS+I + K  +  P ++ +P     +  S+S  + L H+      S++ +I
Sbjct: 149 RCSIIPSTKFLNPAPPIISDPTRQGGVSGSSSHILSLPHQQEEVGASTNTTI 200


>ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Cucumis sativus]
           gi|449532338|ref|XP_004173139.1| PREDICTED: RING-H2 zinc
           finger protein RHA4a-like [Cucumis sativus]
          Length = 196

 Score =  114 bits (286), Expect = 8e-24
 Identities = 56/98 (57%), Positives = 71/98 (72%)
 Frame = -3

Query: 552 NLEDKLTVILFDEDLYAKDSMCCVCLGEFEMNEKLHQIPSCQHVFHGDCIRNWLHSNTTC 373
           NL DKL  I F+E+L  +DS+CCVCLGEFE+ E+L Q+PSC+HVFH DC+ +WL SN+TC
Sbjct: 89  NLIDKLPKIQFNEELKIRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTC 148

Query: 372 PLCRCSVIIAAKDSHHEPLVVPEPATTIMSSNSQEVPL 259
           PLCRCSVI   + S  +P VVP P   +    S E+PL
Sbjct: 149 PLCRCSVIPTTQCS--DPAVVP-PTPPLPLPGSSELPL 183


>ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 211

 Score =  114 bits (286), Expect = 8e-24
 Identities = 55/101 (54%), Positives = 70/101 (69%)
 Frame = -3

Query: 543 DKLTVILFDEDLYAKDSMCCVCLGEFEMNEKLHQIPSCQHVFHGDCIRNWLHSNTTCPLC 364
           DKL  ILFDEDL A+DS+CCVCLGEFE+ E++ QIP C+HVFH +CI +WL SN+TCPLC
Sbjct: 90  DKLPRILFDEDLLARDSLCCVCLGEFELKEEVLQIPYCKHVFHFECIHHWLQSNSTCPLC 149

Query: 363 RCSVIIAAKDSHHEPLVVPEPATTIMSSNSQEVPLEHRVVI 241
           RCS+I   K       + P P   I+SS+    P +H  +I
Sbjct: 150 RCSIIPTTK------FLNPAPPINIISSD----PPQHGAII 180


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