BLASTX nr result

ID: Atractylodes22_contig00029916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029916
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...    61   5e-07
emb|CBI35100.3| unnamed protein product [Vitis vinifera]               61   5e-07
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...    59   1e-06
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...    59   1e-06

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
           vinifera]
          Length = 1142

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = +1

Query: 1   SLADVKKSLDKNPAKQVGLAVENMLKTGRLVSQSTLDLKE 120
           SLA VKK +DKNP++Q+ LAVENMLKTGRLV+QS LDL++
Sbjct: 375 SLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQ 414


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = +1

Query: 1   SLADVKKSLDKNPAKQVGLAVENMLKTGRLVSQSTLDLKE 120
           SLA VKK +DKNP++Q+ LAVENMLKTGRLV+QS LDL++
Sbjct: 368 SLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQ 407


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cucumis sativus]
          Length = 948

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = +1

Query: 1   SLADVKKSLDKNPAKQVGLAVENMLKTGRLVSQSTLDLKEVLIFLV 138
           SLA VKK +DKNP+KQV  AVENMLKTGRLV+Q+ LDL++   F V
Sbjct: 406 SLAHVKKVMDKNPSKQVSSAVENMLKTGRLVTQTGLDLQQRAGFTV 451


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = +1

Query: 1   SLADVKKSLDKNPAKQVGLAVENMLKTGRLVSQSTLDLKEVLIFLV 138
           SLA VKK +DKNP+KQV  AVENMLKTGRLV+Q+ LDL++   F V
Sbjct: 406 SLAHVKKVMDKNPSKQVSSAVENMLKTGRLVTQTGLDLQQRAGFTV 451


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