BLASTX nr result

ID: Atractylodes22_contig00029909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029909
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   117   3e-24
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...   114   2e-23
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   113   3e-23
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   104   1e-20
gb|AAC62795.1| contains similarity to retroviral aspartyl protea...   104   2e-20

>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  117 bits (292), Expect = 3e-24
 Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 31/235 (13%)
 Frame = +3

Query: 48   RPHCTHCNKEGHTVDRCYKLHGFPPGYKPKSKVITR------------------TNMSNM 173
            RP C+  N+ GH  +RCYK HGFPPG+ PK K   +                  T++ +M
Sbjct: 306  RPICSFYNRVGHIAERCYKKHGFPPGFTPKGKAGEKLQKPKPLAANVAESSEVNTSLESM 365

Query: 174  IKEMSTIECEEFMYILSNKMSKV---NVAIVSDPHEQNKGMHH---------VLSFHTYA 317
            +  +S  + ++F+ + S+++        A  S     N G+           +L+   + 
Sbjct: 366  VGNLSKEQLQQFIAMFSSQLQNTPPSTYATASTSQSDNLGICFSPSTYSFIGILTVARHT 425

Query: 318  FPSSLWIIDSGASRHICCDIRMFTNVKNIKGSTVRLSDDTVIPVHNVGTVSIGNTLVPEN 497
              S+ W+IDSGA+ H+  D  +F+++     S V L     + +  VGT+ + + ++ +N
Sbjct: 426  LSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKN 485

Query: 498  VLYIPQFRLNLIFVGELAYTGNYEILFHKNGV-VQDLITRKMISTVDKDQGLYLL 659
            VL+IP+FRLNLI +  L       ++F KN   +QDLI  +M+    +   LYLL
Sbjct: 486  VLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLL 540


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score =  114 bits (284), Expect = 2e-23
 Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 26/237 (10%)
 Frame = +3

Query: 27   AGNRYAKRPHCTHCNKEGHTVDRCYKLHGFPPGYKPKSKVITRTNMSNMIKEMSTI---- 194
            A N+   R  CTHC K GHTVD CY+ HG+PPGYKP S    RT ++N++   S      
Sbjct: 620  ARNKSNGRKACTHCGKIGHTVDVCYRKHGYPPGYKPYSG---RTTVNNVVAVESKATDDQ 676

Query: 195  ----ECEEFMYILSNKMSKVNVAIVSDPHEQNKGMHHV-----LSFHTYAFPSS------ 329
                E  EF+   S +  K  +A++ +P   N  +        +S  T   P++      
Sbjct: 677  AQHHESHEFVRF-SPEQYKALLALIQEPSAGNTALTQPKQVASISSCTVNNPTNPGMSLS 735

Query: 330  ------LWIIDSGASRHICCDIRMFTNVKNIKGSTVRLSDDTVIPVHNVGTVSIGNTLVP 491
                   WI+DSGA+ H+ C +    + K I   TV+L +   +   + GTV + + +  
Sbjct: 736  LSASLTSWILDSGATDHVTCSLHNLHSHKRINPITVKLPNGQYVHATHSGTVQLSSNITL 795

Query: 492  ENVLYIPQFRLNLIFVGELAYTGNYEILFHKNG-VVQDLITRKMISTVDKDQGLYLL 659
             +VLYIP F  NLI + +L  + N E++F     V+Q++     I  V+   GLY L
Sbjct: 796  HDVLYIPSFTFNLISISKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAKHGLYHL 852


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  113 bits (283), Expect = 3e-23
 Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 19/223 (8%)
 Frame = +3

Query: 48   RPHCTHCNKEGHTVDRCYKLHGFPPGYKPKSK-----------------VITRTNMSNMI 176
            RP C++C  +GHT D+CYKLHG+PPG++  +                   +T  + SN  
Sbjct: 1552 RPICSNCGYKGHTADKCYKLHGYPPGHRLANNNNFVHQRHDNTIQDGNDKVTEVSKSNQS 1611

Query: 177  KEMSTIECEEFMYILSNKMSKVNVAIVSDPHEQNKGMHHVLSFHTYAFPSSL-WIIDSGA 353
               +++  +++  +L    + ++    +  + +N+  H   +  + +    L WIIDSGA
Sbjct: 1612 AFFASLNSDQYTQLLGMLQTHLHTP-QNGENFKNETTHIAGTCLSNSLNDPLTWIIDSGA 1670

Query: 354  SRHICCDIRMFTNVKNIKGSTVRLSDDTVIPVHNVGTVSIGNTLVPENVLYIPQFRLNLI 533
            S HIC D  MFTN+ + +   V L   T + V ++G V I N LV ++VLYIP F+ NL+
Sbjct: 1671 SSHICHDKFMFTNLYSAQNMFVILPTKTRLKVEHIGDVFISNDLVLKDVLYIPDFKYNLL 1730

Query: 534  FVGELAYTGNYEILF-HKNGVVQDLITRKMISTVDKDQGLYLL 659
             V  L     + I F   N ++QD    K I   +   GLYLL
Sbjct: 1731 SVSTLLKDDKFAISFADSNCLIQDKWLLKTIGKAELTNGLYLL 1773


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  104 bits (260), Expect = 1e-20
 Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 39/243 (16%)
 Frame = +3

Query: 48  RPHCTHCNKEGHTVDRCYKLHGFPPGY--------------KPKSKVI-----------T 152
           RP C+ CN+ GH  +RCYK HGFPPG+              KPK               +
Sbjct: 258 RPICSFCNRVGHIAERCYKKHGFPPGFVSKYKSQSSGDRLQKPKQVAAQVSFSPPNSGQS 317

Query: 153 RTNMSNMIKEMSTIECEEFMYILSNKMSKV----NVAIVSDPHEQNKGMHH--------- 293
              M +++   S  + ++F+ + S+++  V    N A  S     N G+           
Sbjct: 318 PMTMDHLVGNHSKEQLQQFIALFSSQLPNVTMGSNEASSSKQPMDNSGISFNPTTLVFIG 377

Query: 294 VLSFHTYAFPSSLWIIDSGASRHICCDIRMFTNVKNIKGSTVRLSDDTVIPVHNVGTVSI 473
           +L+   +   +  WIIDSGA+ H+C D  M+T++     S V L +  ++ +  VG V +
Sbjct: 378 LLTVSRHTLANETWIIDSGATHHVCHDRSMYTSIDITTTSNVNLPNGMIVKISGVGIVQL 437

Query: 474 GNTLVPENVLYIPQFRLNLIFVGELAYTGNYEILFHKNG-VVQDLITRKMISTVDKDQGL 650
              +   NVLYIP+FRLNL+ +  L      +++F  +   +QD      I    +   L
Sbjct: 438 NEHITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIGQGRRVANL 497

Query: 651 YLL 659
           Y+L
Sbjct: 498 YVL 500


>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam: rvp.hmm,
            score: 11.80) [Arabidopsis thaliana]
          Length = 1244

 Score =  104 bits (259), Expect = 2e-20
 Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 34/238 (14%)
 Frame = +3

Query: 48   RPHCTHCNKEGHTVDRCYKLHGFPPGYKPK-------------------SKVITRTNMSN 170
            RP C+ CNK GH  ++CYK HG+PPG+K K                     V T+  +  
Sbjct: 290  RPICSFCNKVGHIAEKCYKKHGYPPGFKGKLPEKGTKPQPVAAQVSLLPPMVPTQATLDG 349

Query: 171  MIKEMSTIECEEFMYILSNKMSKVNVAIVSDPHEQNKGMHH--------------VLSFH 308
            ++  +S  + + F+ + S+++     A  SD       + +              +L+  
Sbjct: 350  LLGNLSNDQLQNFIALFSSQLKSQPTASSSDAGISRSPIDYTGISFSNSTYYFVGILNVS 409

Query: 309  TYAFPSSLWIIDSGASRHICCDIRMFTNVKNIKGSTVRLSDDTVIPVHNVGTVSIGNTLV 488
             +   +  W+IDSGA+ H+C D  +F ++ +   S V L   + + +  VG+V I   ++
Sbjct: 410  QHTLSTETWVIDSGATHHVCHDKSLFVSLDHSVVSYVNLPTGSRVKISGVGSVQINENIL 469

Query: 489  PENVLYIPQFRLNLIFVGELAYTGNYEILFHKNGV-VQDLITRKMISTVDKDQGLYLL 659
              NVL++P+FRLNLI +  L       ++F  +   +QDL     I    +   LY+L
Sbjct: 470  LRNVLFLPEFRLNLISISSLTSDIGSRVIFDPSCCEIQDLTKDLRIGRGRRIGNLYVL 527


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