BLASTX nr result

ID: Atractylodes22_contig00029891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029891
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521838.1| pentatricopeptide repeat-containing protein,...   197   6e-49
emb|CBI32449.3| unnamed protein product [Vitis vinifera]              197   7e-49
ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containi...   197   7e-49
ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43

>ref|XP_002521838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538876|gb|EEF40474.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/150 (63%), Positives = 118/150 (78%)
 Frame = -1

Query: 452 ALMKDFIRSGKKSLMPSFIDLMDMYFTLGMHDKLEYTFFQCLEKCCPNRTIYNIYLKSLV 273
           +LM++FI+SG K LMPSF DLM+MY  L +H+KLE TFF CLE C PNR IYN+YL SLV
Sbjct: 475 SLMQEFIKSGLKPLMPSFTDLMNMYLNLNLHEKLESTFFACLENCRPNRNIYNVYLDSLV 534

Query: 272 HVGSLDKAEEVLRQMQSHEAVGVDTKSCNTILRGYLDGREYAKAEKIYALMSEKKFHIEP 93
            VG+LDKAEE    M S+EAVGV+ +SCNTILRGYL   +Y KAEKIY LM +KK+ IEP
Sbjct: 535 KVGNLDKAEEAFNNMCSNEAVGVNIRSCNTILRGYLSSGDYVKAEKIYDLMCQKKYDIEP 594

Query: 92  ALMEKLEHVLRSKEEAIKNPITLKLSKEQR 3
           +LMEKL++VL    + +K P++LKLSK+QR
Sbjct: 595 SLMEKLDYVLSLSRKVVKKPLSLKLSKDQR 624


>emb|CBI32449.3| unnamed protein product [Vitis vinifera]
          Length = 790

 Score =  197 bits (501), Expect = 7e-49
 Identities = 94/150 (62%), Positives = 118/150 (78%)
 Frame = -1

Query: 452 ALMKDFIRSGKKSLMPSFIDLMDMYFTLGMHDKLEYTFFQCLEKCCPNRTIYNIYLKSLV 273
           +LM +FI SG K LMPS+IDLM+MYF L +HDKLE  F++CLEKC PNR IYNIY+ SLV
Sbjct: 431 SLMTEFINSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYECLEKCRPNRAIYNIYMDSLV 490

Query: 272 HVGSLDKAEEVLRQMQSHEAVGVDTKSCNTILRGYLDGREYAKAEKIYALMSEKKFHIEP 93
            +G+LDKAEE+  QM S+ A+GV+TKSCNTIL GYL   +Y KAEKIY LM +KK+ I+ 
Sbjct: 491 QIGNLDKAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDYLKAEKIYDLMCQKKYAIDA 550

Query: 92  ALMEKLEHVLRSKEEAIKNPITLKLSKEQR 3
            LMEKL++VL    + +K P++LKLSKEQR
Sbjct: 551 PLMEKLDYVLSLSRKVVKRPVSLKLSKEQR 580


>ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like [Vitis vinifera]
          Length = 823

 Score =  197 bits (501), Expect = 7e-49
 Identities = 94/150 (62%), Positives = 118/150 (78%)
 Frame = -1

Query: 452 ALMKDFIRSGKKSLMPSFIDLMDMYFTLGMHDKLEYTFFQCLEKCCPNRTIYNIYLKSLV 273
           +LM +FI SG K LMPS+IDLM+MYF L +HDKLE  F++CLEKC PNR IYNIY+ SLV
Sbjct: 464 SLMTEFINSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYECLEKCRPNRAIYNIYMDSLV 523

Query: 272 HVGSLDKAEEVLRQMQSHEAVGVDTKSCNTILRGYLDGREYAKAEKIYALMSEKKFHIEP 93
            +G+LDKAEE+  QM S+ A+GV+TKSCNTIL GYL   +Y KAEKIY LM +KK+ I+ 
Sbjct: 524 QIGNLDKAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDYLKAEKIYDLMCQKKYAIDA 583

Query: 92  ALMEKLEHVLRSKEEAIKNPITLKLSKEQR 3
            LMEKL++VL    + +K P++LKLSKEQR
Sbjct: 584 PLMEKLDYVLSLSRKVVKRPVSLKLSKEQR 613


>ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like, partial [Cucumis sativus]
          Length = 747

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/150 (56%), Positives = 114/150 (76%)
 Frame = -1

Query: 452 ALMKDFIRSGKKSLMPSFIDLMDMYFTLGMHDKLEYTFFQCLEKCCPNRTIYNIYLKSLV 273
           ++M  FI S  K L P+++DLM+M+F L + DKLE TF QCLEKC PNRTIY+IYL SLV
Sbjct: 386 SIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKCKPNRTIYSIYLDSLV 445

Query: 272 HVGSLDKAEEVLRQMQSHEAVGVDTKSCNTILRGYLDGREYAKAEKIYALMSEKKFHIEP 93
            VG+LD+AEE+  QM+++  +G++ +SCN ILRGYL    Y KAEKIY LM +K++ I+P
Sbjct: 446 KVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAEKIYDLMCQKRYDIDP 505

Query: 92  ALMEKLEHVLRSKEEAIKNPITLKLSKEQR 3
            LMEKLE++L    + +K P++LKLSKEQR
Sbjct: 506 PLMEKLEYILSLSRKEVKKPMSLKLSKEQR 535


>ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like [Cucumis sativus]
          Length = 797

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/150 (56%), Positives = 114/150 (76%)
 Frame = -1

Query: 452 ALMKDFIRSGKKSLMPSFIDLMDMYFTLGMHDKLEYTFFQCLEKCCPNRTIYNIYLKSLV 273
           ++M  FI S  K L P+++DLM+M+F L + DKLE TF QCLEKC PNRTIY+IYL SLV
Sbjct: 436 SIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKCKPNRTIYSIYLDSLV 495

Query: 272 HVGSLDKAEEVLRQMQSHEAVGVDTKSCNTILRGYLDGREYAKAEKIYALMSEKKFHIEP 93
            VG+LD+AEE+  QM+++  +G++ +SCN ILRGYL    Y KAEKIY LM +K++ I+P
Sbjct: 496 KVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAEKIYDLMCQKRYDIDP 555

Query: 92  ALMEKLEHVLRSKEEAIKNPITLKLSKEQR 3
            LMEKLE++L    + +K P++LKLSKEQR
Sbjct: 556 PLMEKLEYILSLSRKEVKKPMSLKLSKEQR 585


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