BLASTX nr result

ID: Atractylodes22_contig00029871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029871
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18026.3| unnamed protein product [Vitis vinifera]              305   5e-81
ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   305   5e-81
ref|XP_002528699.1| transcription elongation factor s-II, putati...   296   2e-78
ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|2...   289   3e-76
ref|XP_004160740.1| PREDICTED: transcription elongation factor A...   285   5e-75

>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  305 bits (781), Expect = 5e-81
 Identities = 137/182 (75%), Positives = 162/182 (89%)
 Frame = +2

Query: 59  PPELTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPYRVAVSVESAMFEK 238
           PP+LT+++ C D +RDK+RELLAEAL KV  EA+E+ +DEVN CDP RVAVSVES MFEK
Sbjct: 141 PPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEK 200

Query: 239 WGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPEEMASNERQMQNVK 418
            GRSNG QKFKYRSIMFN+KDP NPD RRK+LLG + P+R++ ++PEEMASN+RQ +N +
Sbjct: 201 MGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQ 260

Query: 419 IKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMTTFVTCVNCDNHWK 598
           IKEKALF+CERGGPPKATTDQF+CGRCG+R+ TYYQLQTRSADEPMTTFVTCVNC+NHWK
Sbjct: 261 IKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 320

Query: 599 FC 604
           FC
Sbjct: 321 FC 322


>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score =  305 bits (781), Expect = 5e-81
 Identities = 137/182 (75%), Positives = 162/182 (89%)
 Frame = +2

Query: 59  PPELTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPYRVAVSVESAMFEK 238
           PP+LT+++ C D +RDK+RELLAEAL KV  EA+E+ +DEVN CDP RVAVSVES MFEK
Sbjct: 186 PPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEK 245

Query: 239 WGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPEEMASNERQMQNVK 418
            GRSNG QKFKYRSIMFN+KDP NPD RRK+LLG + P+R++ ++PEEMASN+RQ +N +
Sbjct: 246 MGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQ 305

Query: 419 IKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMTTFVTCVNCDNHWK 598
           IKEKALF+CERGGPPKATTDQF+CGRCG+R+ TYYQLQTRSADEPMTTFVTCVNC+NHWK
Sbjct: 306 IKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 365

Query: 599 FC 604
           FC
Sbjct: 366 FC 367


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
           gi|223531871|gb|EEF33688.1| transcription elongation
           factor s-II, putative [Ricinus communis]
          Length = 342

 Score =  296 bits (758), Expect = 2e-78
 Identities = 136/182 (74%), Positives = 158/182 (86%)
 Frame = +2

Query: 59  PPELTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPYRVAVSVESAMFEK 238
           PP+LT++V C D +RDKIRELL EAL KV  EA E+ RDE++ CDP RVAVSVESAMFEK
Sbjct: 161 PPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGRDEISKCDPIRVAVSVESAMFEK 220

Query: 239 WGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPEEMASNERQMQNVK 418
            GRSNGAQKFKYRSIMFN+KDP NPD RRK+LLG + PER++ +TPEEMAS ERQ +  +
Sbjct: 221 MGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEEMASKERQEEINQ 280

Query: 419 IKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMTTFVTCVNCDNHWK 598
           IKEKALF+CERGGP KATTDQF+C RCG+R+CTYYQ+QTRSADEPMTT+VTCVNC+ HWK
Sbjct: 281 IKEKALFDCERGGPAKATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNKHWK 340

Query: 599 FC 604
           FC
Sbjct: 341 FC 342


>ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|222867715|gb|EEF04846.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  289 bits (740), Expect = 3e-76
 Identities = 133/182 (73%), Positives = 157/182 (86%)
 Frame = +2

Query: 59  PPELTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPYRVAVSVESAMFEK 238
           PP+L +LV C D +RDKIRELLAEAL KV  EA+E+ RDEV  CDP RVAVSVESAMFEK
Sbjct: 153 PPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESAMFEK 212

Query: 239 WGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPEEMASNERQMQNVK 418
            GRSNGAQK KYRSIMFN+KD  NPD RRK+LLG + P+R++ + PEEMAS +R+ +N +
Sbjct: 213 LGRSNGAQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQ 272

Query: 419 IKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMTTFVTCVNCDNHWK 598
           IKEKALF+CERGG  +ATTDQF+CGRCG+R+CTYYQ+QTRSADEPMTT+VTCVNC+NHWK
Sbjct: 273 IKEKALFDCERGGKAEATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWK 332

Query: 599 FC 604
           FC
Sbjct: 333 FC 334


>ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
           [Cucumis sativus]
          Length = 290

 Score =  285 bits (729), Expect = 5e-75
 Identities = 132/182 (72%), Positives = 155/182 (85%)
 Frame = +2

Query: 59  PPELTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPYRVAVSVESAMFEK 238
           PP+LTS++  KD  RDKIRELL EA  KVPGEA+EE  DEVN  DP RVAVSVES MFE 
Sbjct: 109 PPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFEN 168

Query: 239 WGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPEEMASNERQMQNVK 418
           WG S GAQK KYRSIMFN+KDPKNPDFRRK+LLG + PER++ ++  +MAS++R+ +N +
Sbjct: 169 WGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKRENEE 228

Query: 419 IKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMTTFVTCVNCDNHWK 598
           I +KALF+CERGG PKATTDQF+CGRCG+R+ TYYQLQTRSADEPMTTFVTCVNC+NHWK
Sbjct: 229 IAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 288

Query: 599 FC 604
           FC
Sbjct: 289 FC 290


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