BLASTX nr result

ID: Atractylodes22_contig00029870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029870
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18026.3| unnamed protein product [Vitis vinifera]              281   7e-74
ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   281   7e-74
ref|XP_002528699.1| transcription elongation factor s-II, putati...   272   4e-71
ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|2...   271   1e-70
ref|XP_004160740.1| PREDICTED: transcription elongation factor A...   266   4e-69

>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  281 bits (720), Expect = 7e-74
 Identities = 136/206 (66%), Positives = 157/206 (76%)
 Frame = -1

Query: 712 SLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAVSVESAMFEKWGRSN 533
           +++ C D +RDK+RELL+EAL KV  E ++D++DEV+A DP RVAVSVES MFEK GRSN
Sbjct: 146 AMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSN 205

Query: 532 GAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMASTERQMENLKIKEKA 353
           G QKFKYRSIMFNIKDP NPD RRKVLLG VKP+R++ ++PEEMAS +RQ EN +IKEKA
Sbjct: 206 GTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKA 265

Query: 352 LFDCERGGPPKATTDQFRCGRCGKRKCTYYQLQTRSADEPMTTFVTCVXXXXXXXXXXXX 173
           LFDCERGGPPKATTDQF+CGRCG+RK TYYQLQTRSADEPMTTF                
Sbjct: 266 LFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF---------------- 309

Query: 172 XXXXXXXXXXXTFVTCVNCDNHWKFC 95
                        VTCVNC+NHWKFC
Sbjct: 310 -------------VTCVNCNNHWKFC 322


>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score =  281 bits (720), Expect = 7e-74
 Identities = 136/206 (66%), Positives = 157/206 (76%)
 Frame = -1

Query: 712 SLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAVSVESAMFEKWGRSN 533
           +++ C D +RDK+RELL+EAL KV  E ++D++DEV+A DP RVAVSVES MFEK GRSN
Sbjct: 191 AMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSN 250

Query: 532 GAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMASTERQMENLKIKEKA 353
           G QKFKYRSIMFNIKDP NPD RRKVLLG VKP+R++ ++PEEMAS +RQ EN +IKEKA
Sbjct: 251 GTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKA 310

Query: 352 LFDCERGGPPKATTDQFRCGRCGKRKCTYYQLQTRSADEPMTTFVTCVXXXXXXXXXXXX 173
           LFDCERGGPPKATTDQF+CGRCG+RK TYYQLQTRSADEPMTTF                
Sbjct: 311 LFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF---------------- 354

Query: 172 XXXXXXXXXXXTFVTCVNCDNHWKFC 95
                        VTCVNC+NHWKFC
Sbjct: 355 -------------VTCVNCNNHWKFC 367


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
           gi|223531871|gb|EEF33688.1| transcription elongation
           factor s-II, putative [Ricinus communis]
          Length = 342

 Score =  272 bits (696), Expect = 4e-71
 Identities = 136/206 (66%), Positives = 151/206 (73%)
 Frame = -1

Query: 712 SLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAVSVESAMFEKWGRSN 533
           ++V C D +RDKIRELL EAL KV  E  +D RDE+   DP RVAVSVESAMFEK GRSN
Sbjct: 166 AIVKCNDALRDKIRELLVEALSKVVSEANEDGRDEISKCDPIRVAVSVESAMFEKMGRSN 225

Query: 532 GAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMASTERQMENLKIKEKA 353
           GAQKFKYRSIMFN+KDP NPD RRKVLLG VKPER++ +TPEEMAS ERQ E  +IKEKA
Sbjct: 226 GAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEEMASKERQEEINQIKEKA 285

Query: 352 LFDCERGGPPKATTDQFRCGRCGKRKCTYYQLQTRSADEPMTTFVTCVXXXXXXXXXXXX 173
           LFDCERGGP KATTDQF+C RCG+RKCTYYQ+QTRSADEPMTT+                
Sbjct: 286 LFDCERGGPAKATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTY---------------- 329

Query: 172 XXXXXXXXXXXTFVTCVNCDNHWKFC 95
                        VTCVNC+ HWKFC
Sbjct: 330 -------------VTCVNCNKHWKFC 342


>ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|222867715|gb|EEF04846.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  271 bits (693), Expect = 1e-70
 Identities = 134/206 (65%), Positives = 155/206 (75%)
 Frame = -1

Query: 712 SLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAVSVESAMFEKWGRSN 533
           +LV C D +RDKIRELL+EAL KV  E ++D+RDEV+A DP RVAVSVESAMFEK GRSN
Sbjct: 158 TLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESAMFEKLGRSN 217

Query: 532 GAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMASTERQMENLKIKEKA 353
           GAQK KYRSIMFNIKD  NPD RRKVLLG V+P+R++ + PEEMAS +R+ EN +IKEKA
Sbjct: 218 GAQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQIKEKA 277

Query: 352 LFDCERGGPPKATTDQFRCGRCGKRKCTYYQLQTRSADEPMTTFVTCVXXXXXXXXXXXX 173
           LFDCERGG  +ATTDQF+CGRCG+RKCTYYQ+QTRSADEPMTT+                
Sbjct: 278 LFDCERGGKAEATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTY---------------- 321

Query: 172 XXXXXXXXXXXTFVTCVNCDNHWKFC 95
                        VTCVNC+NHWKFC
Sbjct: 322 -------------VTCVNCNNHWKFC 334


>ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
           [Cucumis sativus]
          Length = 290

 Score =  266 bits (679), Expect = 4e-69
 Identities = 131/206 (63%), Positives = 151/206 (73%)
 Frame = -1

Query: 712 SLVYCKDPVRDKIRELLSEALCKVPGEVEDDLRDEVDASDPYRVAVSVESAMFEKWGRSN 533
           S++  KD  RDKIRELL EA  KVPGE +++  DEV+ASDP RVAVSVES MFE WG S 
Sbjct: 114 SMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFENWGGST 173

Query: 532 GAQKFKYRSIMFNIKDPKNPDFRRKVLLGHVKPERILELTPEEMASTERQMENLKIKEKA 353
           GAQK KYRSIMFN+KDPKNPDFRRKVLLG +KPER++ ++  +MAS +R+ EN +I +KA
Sbjct: 174 GAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKRENEEIAQKA 233

Query: 352 LFDCERGGPPKATTDQFRCGRCGKRKCTYYQLQTRSADEPMTTFVTCVXXXXXXXXXXXX 173
           LFDCERGG PKATTDQF+CGRCG+RK TYYQLQTRSADEPMTTF                
Sbjct: 234 LFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF---------------- 277

Query: 172 XXXXXXXXXXXTFVTCVNCDNHWKFC 95
                        VTCVNC+NHWKFC
Sbjct: 278 -------------VTCVNCNNHWKFC 290


Top