BLASTX nr result

ID: Atractylodes22_contig00029868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029868
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...   200   1e-49
emb|CBI30594.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group] g...   189   2e-46

>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 534

 Score =  200 bits (509), Expect = 1e-49
 Identities = 110/177 (62%), Positives = 118/177 (66%)
 Frame = +3

Query: 15  SMPAQKRSNDSVYEDEDEDELQRNNQNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 194
           SMPAQKR+ D++    + D LQR++ N                                 
Sbjct: 101 SMPAQKRAFDAM----EGDPLQRHHGN-------HHEPPEDGDGYESDRSPSWSNGEKDE 149

Query: 195 FVYVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRAHCAS 374
           FV VKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACR HCAS
Sbjct: 150 FVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 209

Query: 375 RRSLRDDPNYDALIAILFPDIDRYXXXXXXXXXXXXXRNKQIQASIAQTSRRQLEAL 545
           RRSLRDDPNYDALIA L+PDID+Y             RNKQIQASIAQT RRQ EAL
Sbjct: 210 RRSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEAL 266


>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  199 bits (505), Expect = 3e-49
 Identities = 109/176 (61%), Positives = 117/176 (66%)
 Frame = +3

Query: 18  MPAQKRSNDSVYEDEDEDELQRNNQNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF 197
           MPAQKR+ D++    + D LQR++ N                                 F
Sbjct: 1   MPAQKRAFDAM----EGDPLQRHHGN-------HHEPPEDGDGYESDRSPSWSNGEKDEF 49

Query: 198 VYVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRAHCASR 377
           V VKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACR HCASR
Sbjct: 50  VIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 109

Query: 378 RSLRDDPNYDALIAILFPDIDRYXXXXXXXXXXXXXRNKQIQASIAQTSRRQLEAL 545
           RSLRDDPNYDALIA L+PDID+Y             RNKQIQASIAQT RRQ EAL
Sbjct: 110 RSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEAL 165


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  194 bits (492), Expect = 1e-47
 Identities = 102/181 (56%), Positives = 116/181 (64%), Gaps = 5/181 (2%)
 Frame = +3

Query: 18  MPAQKRSNDSVYEDED-----EDELQRNNQNIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           MPAQKRS +++ +++D     + +   NN                               
Sbjct: 1   MPAQKRSYETLQKEDDALLRQQQDHTNNNHEQKQEPRSDIDDDGGVESDRSQPSSNINED 60

Query: 183 XXXXFVYVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRA 362
               +V VKL+EIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACR 
Sbjct: 61  VKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 120

Query: 363 HCASRRSLRDDPNYDALIAILFPDIDRYXXXXXXXXXXXXXRNKQIQASIAQTSRRQLEA 542
           HCASRRSLRDDPNYDALIA L+PDID+Y             RNK+IQA+IAQT  RQ EA
Sbjct: 121 HCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQATIAQTFDRQAEA 180

Query: 543 L 545
           L
Sbjct: 181 L 181


>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  192 bits (488), Expect = 3e-47
 Identities = 104/192 (54%), Positives = 118/192 (61%), Gaps = 16/192 (8%)
 Frame = +3

Query: 18  MPAQKRSNDSVYEDEDE-------DELQRNNQNIXXXXXXXXXXXXXXXXXXXXXXXXXX 176
           MPAQKRS++++ +++D+       D    NN N                           
Sbjct: 1   MPAQKRSHETLQKEDDDALIQQQQDHTNNNNNNNNHEQKQQPHDDIDDDGGGGGGDEQSD 60

Query: 177 XXXXXX---------FVYVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR 329
                          +V VKL+EIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR
Sbjct: 61  RSQSSSSINEDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMR 120

Query: 330 LGNNECPACRAHCASRRSLRDDPNYDALIAILFPDIDRYXXXXXXXXXXXXXRNKQIQAS 509
           LGNNECPACR HCASRRSLRDDPNYDALI+ L+PDID+Y             RNKQIQA+
Sbjct: 121 LGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFQEEEKARNKQIQAT 180

Query: 510 IAQTSRRQLEAL 545
           IAQT  RQ EAL
Sbjct: 181 IAQTFHRQAEAL 192


>ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group]
           gi|53792319|dbj|BAD53026.1| putative ring finger protein
           1 [Oryza sativa Japonica Group]
           gi|215767809|dbj|BAH00038.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222619392|gb|EEE55524.1| hypothetical protein
           OsJ_03751 [Oryza sativa Japonica Group]
           gi|255673777|dbj|BAF06431.2| Os01g0796700 [Oryza sativa
           Japonica Group]
          Length = 489

 Score =  189 bits (480), Expect = 2e-46
 Identities = 90/117 (76%), Positives = 98/117 (83%)
 Frame = +3

Query: 195 FVYVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRAHCAS 374
           F+ VKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCR+CIDKSMRLGNNECPACR HCAS
Sbjct: 99  FIIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 158

Query: 375 RRSLRDDPNYDALIAILFPDIDRYXXXXXXXXXXXXXRNKQIQASIAQTSRRQLEAL 545
           RRSLRDDPNYDALIA L+PDID+Y             RNK+IQA+I +T RRQ EA+
Sbjct: 159 RRSLRDDPNYDALIAALYPDIDKYEEEELAFSEEERSRNKKIQATIEETIRRQSEAV 215


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