BLASTX nr result

ID: Atractylodes22_contig00029864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029864
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              255   7e-66
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   255   7e-66
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   223   2e-56

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  255 bits (651), Expect = 7e-66
 Identities = 123/229 (53%), Positives = 174/229 (75%)
 Frame = -3

Query: 688  EIVLEMDDEGITPDLSTFRVLLAGYCKARQFDDVKVMITKMVQNGLIELSPLQDPISKAF 509
            +I+ EM D GI PDL TFRVLLAGYCKAR+F + K  + +MV  GLI+L   +DP+SKAF
Sbjct: 434  DILHEMVDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAF 493

Query: 508  TLLGIDPMAVRMRRDNDMAFSKTEFYDNMGNGLYLEGDIVDYDQTMTGVLNDSMIPDYNR 329
             +L +DP+A+R++RDND+ FSKTEF+DN+GNGLYLE D+ +Y++ +TG+L DSM+PD+N 
Sbjct: 494  MVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGLYLETDVDEYEKKVTGILEDSMVPDFNL 553

Query: 328  LILKDDGLNSNKTVDVTIDELVHWGQELSFAAFSTLLKKVHASNSGFKTVTTLLENMPKL 149
            LI +     + KT  + +DE+V WGQELS +AFS LL+ + AS+   K VT LLE MPKL
Sbjct: 554  LITRACAGGNVKTAMMVVDEMVRWGQELSLSAFSALLEGLCASHFSIKAVTGLLEKMPKL 613

Query: 148  HNELDEETLNLLVQMHIKRGFLHKARKLYDEMVKRNLKINNKTHCALVS 2
             N++DEETLNLLVQ H K+GF+ K + + + M++R+L + ++T+ AL++
Sbjct: 614  VNQVDEETLNLLVQTHCKKGFIGKGKIILNGMLQRHLSVKSETYVALLA 662


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score =  255 bits (651), Expect = 7e-66
 Identities = 123/229 (53%), Positives = 174/229 (75%)
 Frame = -3

Query: 688  EIVLEMDDEGITPDLSTFRVLLAGYCKARQFDDVKVMITKMVQNGLIELSPLQDPISKAF 509
            +I+ EM D GI PDL TFRVLLAGYCKAR+F + K  + +MV  GLI+L   +DP+SKAF
Sbjct: 451  DILHEMVDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAF 510

Query: 508  TLLGIDPMAVRMRRDNDMAFSKTEFYDNMGNGLYLEGDIVDYDQTMTGVLNDSMIPDYNR 329
             +L +DP+A+R++RDND+ FSKTEF+DN+GNGLYLE D+ +Y++ +TG+L DSM+PD+N 
Sbjct: 511  MVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGLYLETDVDEYEKKVTGILEDSMVPDFNL 570

Query: 328  LILKDDGLNSNKTVDVTIDELVHWGQELSFAAFSTLLKKVHASNSGFKTVTTLLENMPKL 149
            LI +     + KT  + +DE+V WGQELS +AFS LL+ + AS+   K VT LLE MPKL
Sbjct: 571  LITRACAGGNVKTAMMVVDEMVRWGQELSLSAFSALLEGLCASHFSIKAVTGLLEKMPKL 630

Query: 148  HNELDEETLNLLVQMHIKRGFLHKARKLYDEMVKRNLKINNKTHCALVS 2
             N++DEETLNLLVQ H K+GF+ K + + + M++R+L + ++T+ AL++
Sbjct: 631  VNQVDEETLNLLVQTHCKKGFIGKGKIILNGMLQRHLSVKSETYVALLA 679


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
            predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  233 bits (595), Expect = 2e-59
 Identities = 115/228 (50%), Positives = 164/228 (71%)
 Frame = -3

Query: 688  EIVLEMDDEGITPDLSTFRVLLAGYCKARQFDDVKVMITKMVQNGLIELSPLQDPISKAF 509
            +I+ EM D G  P LSTF++LLAGYC+AR+FD+VKV+I +MV  GLIE S L+DP+SKAF
Sbjct: 336  DILDEMVDMGTAPVLSTFKILLAGYCRARRFDEVKVVIHEMVNRGLIESSALEDPLSKAF 395

Query: 508  TLLGIDPMAVRMRRDNDMAFSKTEFYDNMGNGLYLEGDIVDYDQTMTGVLNDSMIPDYNR 329
             +L +  ++VR++RDND+ FSKTEF+DN+GNGLYL+ D+ +YD+ + G+L DSM+PD++ 
Sbjct: 396  MVLELKTLSVRLKRDNDVEFSKTEFFDNLGNGLYLDTDLDEYDKRVAGILEDSMVPDFDF 455

Query: 328  LILKDDGLNSNKTVDVTIDELVHWGQELSFAAFSTLLKKVHASNSGFKTVTTLLENMPKL 149
            L+ K+    + K       E+  WGQELS +  S LLK +    S  K  ++LLE MPKL
Sbjct: 456  LVRKECSNGNFKVAYSLTGEMARWGQELSLSVVSALLKGLCTPRSYIKLCSSLLEKMPKL 515

Query: 148  HNELDEETLNLLVQMHIKRGFLHKARKLYDEMVKRNLKINNKTHCALV 5
             N+LD+E LNLLVQ + K G  HK   ++++M++RNL IN++T  AL+
Sbjct: 516  VNQLDQEVLNLLVQAYCKIGLTHKGWLIFNQMLQRNLTINSETFTALI 563


>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Glycine max]
          Length = 1186

 Score =  223 bits (569), Expect = 2e-56
 Identities = 107/228 (46%), Positives = 167/228 (73%)
 Frame = -3

Query: 688  EIVLEMDDEGITPDLSTFRVLLAGYCKARQFDDVKVMITKMVQNGLIELSPLQDPISKAF 509
            +IV EM + GI PD+STFRVL+AGYCK+R+FD+VK +I +M   GLI+L+ +++PISKAF
Sbjct: 368  DIVDEMIERGILPDISTFRVLIAGYCKSRRFDEVKSLIHEMENRGLIKLALMENPISKAF 427

Query: 508  TLLGIDPMAVRMRRDNDMAFSKTEFYDNMGNGLYLEGDIVDYDQTMTGVLNDSMIPDYNR 329
             +LG+ P++V+++RDND   SKTEF+D +GNGLYL+ D+ +YD+ +T  L +SM+P++N 
Sbjct: 428  LILGLGPLSVKLKRDNDGGLSKTEFFDEVGNGLYLDTDVDEYDKHITLDLEESMVPNFNS 487

Query: 328  LILKDDGLNSNKTVDVTIDELVHWGQELSFAAFSTLLKKVHASNSGFKTVTTLLENMPKL 149
             + K+    + K   V ++E++ WGQEL F  FS L++++ +S S  K++T LLE MPK 
Sbjct: 488  FVSKECSDGNLKNALVLVEEMLCWGQELLFPEFSNLVRQLCSSRSQIKSMTKLLEQMPKS 547

Query: 148  HNELDEETLNLLVQMHIKRGFLHKARKLYDEMVKRNLKINNKTHCALV 5
             ++LD ETLNL+VQ + K+G L KA+ + D M++    + N+T+ A++
Sbjct: 548  AHKLDPETLNLVVQAYSKKGLLFKAKIILDGMLQNEFHVKNETYTAIL 595


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  223 bits (569), Expect = 2e-56
 Identities = 107/228 (46%), Positives = 166/228 (72%)
 Frame = -3

Query: 688  EIVLEMDDEGITPDLSTFRVLLAGYCKARQFDDVKVMITKMVQNGLIELSPLQDPISKAF 509
            +I+ EM + G+TP+LS FR LLAGYCKARQFD+VK+M+ +M++ GL++ S L++P+S+AF
Sbjct: 372  DILDEMVNMGVTPNLSFFRTLLAGYCKARQFDEVKMMVHEMLKCGLVKSSSLENPLSEAF 431

Query: 508  TLLGIDPMAVRMRRDNDMAFSKTEFYDNMGNGLYLEGDIVDYDQTMTGVLNDSMIPDYNR 329
             +LG  P +VR++RDN++ FSKTEF+DN+GNGLYL+ +I +Y++ ++G+L DSM+PD+N 
Sbjct: 432  MVLGFSPFSVRLKRDNNVGFSKTEFFDNIGNGLYLDTNIDEYEKKVSGILKDSMLPDFNL 491

Query: 328  LILKDDGLNSNKTVDVTIDELVHWGQELSFAAFSTLLKKVHASNSGFKTVTTLLENMPKL 149
            LI +     + K   + IDE+  WGQELS +  + L++ + AS S  +    L+E MPKL
Sbjct: 492  LIREGCDQGNFKAALLLIDEMFRWGQELSLSVLAALVRGLCASRSHIRACIHLIEKMPKL 551

Query: 148  HNELDEETLNLLVQMHIKRGFLHKARKLYDEMVKRNLKINNKTHCALV 5
             N+LD+E LNLLVQ   K G ++  R ++ +M+ +++ I N T+ AL+
Sbjct: 552  ANQLDDEVLNLLVQACCKSGLMYHGRLIFHQMLLKDVIIENGTYTALI 599


Top