BLASTX nr result

ID: Atractylodes22_contig00029831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029831
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated p...   145   1e-32
gb|AFK39204.1| unknown [Lotus japonicus]                              144   3e-32
ref|XP_002519649.1| conserved hypothetical protein [Ricinus comm...   140   2e-31
ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|2...   138   1e-30
ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262...   137   2e-30

>ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|357447245|ref|XP_003593898.1| Small
           nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482944|gb|AES64147.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482946|gb|AES64149.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|388515765|gb|AFK45944.1| unknown
           [Medicago truncatula]
          Length = 113

 Score =  145 bits (365), Expect = 1e-32
 Identities = 67/90 (74%), Positives = 78/90 (86%)
 Frame = -1

Query: 534 GQTSFEDKSNISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQDTVEFRSTRRSS 355
           G +   +   +S V+KLLFR+MLVG+ DGRFF+G FYCMDKQGNIILQDTVE+RSTRRSS
Sbjct: 14  GSSDSLESDRVSRVRKLLFRQMLVGIKDGRFFLGNFYCMDKQGNIILQDTVEYRSTRRSS 73

Query: 354 SSPMEQRGLGLILIPSSCRISCHVDCSIDE 265
            SPMEQR +GLILIPSSCR+SCHVDCS+DE
Sbjct: 74  PSPMEQRCIGLILIPSSCRMSCHVDCSVDE 103


>gb|AFK39204.1| unknown [Lotus japonicus]
          Length = 111

 Score =  144 bits (362), Expect = 3e-32
 Identities = 67/85 (78%), Positives = 75/85 (88%)
 Frame = -1

Query: 519 EDKSNISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQDTVEFRSTRRSSSSPME 340
           +  S +S V+KLLFRRMLVG+ DGRFF+G FYC+DKQGNIILQD VE+RSTRRSS SPME
Sbjct: 17  DSSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPSPME 76

Query: 339 QRGLGLILIPSSCRISCHVDCSIDE 265
           QR LGLILIPSSCR +CHVDCSIDE
Sbjct: 77  QRCLGLILIPSSCRATCHVDCSIDE 101


>ref|XP_002519649.1| conserved hypothetical protein [Ricinus communis]
           gi|223541066|gb|EEF42622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score =  140 bits (354), Expect = 2e-31
 Identities = 70/106 (66%), Positives = 85/106 (80%), Gaps = 7/106 (6%)
 Frame = -1

Query: 561 EMENAMH-AAGQTSFEDKSN------ISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGN 403
           ++E AM  +A Q    DKSN      +S V+KLLFR+MLVG+ DGRFF+G F+C+DKQGN
Sbjct: 4   DVEKAMEVSAAQPGSSDKSNSNSSGPVSRVRKLLFRKMLVGIKDGRFFLGTFHCIDKQGN 63

Query: 402 IILQDTVEFRSTRRSSSSPMEQRGLGLILIPSSCRISCHVDCSIDE 265
           IILQD VE+RSTRR+S SPMEQR LGLILIP+SCR +CHVDCSI+E
Sbjct: 64  IILQDAVEYRSTRRTSPSPMEQRCLGLILIPASCRTTCHVDCSIEE 109


>ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|222869442|gb|EEF06573.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  138 bits (348), Expect = 1e-30
 Identities = 67/101 (66%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
 Frame = -1

Query: 558 MENAMHAAGQTSFEDKSN---ISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQD 388
           ME  M  +  T   + S+   +S  +KLLFRRMLVG+ DGRFF+G+F+C+DKQGNIILQD
Sbjct: 1   MEEEMEISSSTQATESSSSDIVSRARKLLFRRMLVGIKDGRFFLGSFHCIDKQGNIILQD 60

Query: 387 TVEFRSTRRSSSSPMEQRGLGLILIPSSCRISCHVDCSIDE 265
            VE+R+T RSS SPMEQR LGLILIPSSCR SCHVDCSI+E
Sbjct: 61  AVEYRNTHRSSPSPMEQRCLGLILIPSSCRTSCHVDCSIEE 101


>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
          Length = 116

 Score =  137 bits (346), Expect = 2e-30
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -1

Query: 504 ISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQDTVEFRSTRRSSSSPMEQRGLG 325
           ++ V+ LLFRRMLVGV+DGRFF+G+F+CMDKQGNIILQDTVE+RSTRRSS SPMEQR LG
Sbjct: 28  VTKVRMLLFRRMLVGVSDGRFFLGSFHCMDKQGNIILQDTVEYRSTRRSSPSPMEQRCLG 87

Query: 324 LILIPSSCRISCHVDCSIDE 265
           LILIP SCR SCHVDCSI+E
Sbjct: 88  LILIPFSCRTSCHVDCSIEE 107


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